RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ADGRF1Q5T601 910 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 NUDT18Q6ZVK8 323 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 ARCQ7LC44 396 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 MCOLN2Q8IZK6 566 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 NAT16Q8N8M0 369 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 C3orf20Q8ND61 904 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 CCDC26Q8TAB7 109 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 DDI1Q8WTU0 396 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 AZIN2Q96A70 460 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TRIM11Q96F44 468 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 SLC39A13Q96H72 371 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 VCPIP1Q96JH7 1222 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 BTN2A3PQ96KV6 586 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PNKPQ96T60 521 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PHOX2BQ99453 314 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PRRX2Q99811 253 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TAS2R14Q9NYV8 317 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 MARK1Q9P0L2 795 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 DEC1Q9P2X7 70 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 ADAMTS1Q9UHI8 967 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PAXBP1Q9Y5B6 917 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 COL4A2P08572 1712 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 USP34Q70CQ2 3546 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 TYW5A2RUC4 315 aaKnown RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 AKR1B15C9JRZ8 316 aaPredicted RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 RTN2O75298 545 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 FTLP02792 175 aaPredicted RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 CHRNB1P11230 501 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 PDGFRAP16234 1089 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 SDC4P31431 198 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 FLT3P36888 993 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 OPRD1P41143 372 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 SLC6A11P48066 632 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 ZNF75DP51815 510 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 DEUP1Q05D60 604 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 FBXO43Q4G163 708 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 MPPE1Q53F39 396 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 HGSNATQ68CP4 663 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 FSTL4Q6MZW2 842 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 FAM217AQ8IXS0 508 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 DRC7Q8IY82 874 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 SYNPOQ8N3V7 929 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 CLDN23Q96B33 292 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 TMA16Q96EY4 203 aaKnown RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 CFAP57Q96MR6 1250 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 NPY6RQ99463 290 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 DNAJC7Q99615 494 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 IER2Q9BTL4 223 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 DEF6Q9H4E7 631 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 RBM12Q9NTZ6 932 aaKnown RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 DNAJC17Q9NVM6 304 aaKnown RBP14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 PLK2Q9NYY3 685 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 STOML2Q9UJZ1 356 aa14.56□□□□□ -0.08
GTF3C3-206ENST00000448539 COL4A3Q01955 1670 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 CACNG3O60359 315 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 TSPAN3O60637 253 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 MFAP3LO75121 409 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 TULP3O75386 442 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 EGFP01133 1207 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 HNRNPH3P31942 346 aaKnown RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 ADKP55263 362 aaKnown RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 KDSRQ06136 332 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 PPP2R5DQ14738 602 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 GAB4Q2WGN9 574 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 NAIF1Q69YI7 327 aaPredicted RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 GRAMD4Q6IC98 578 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 DCUN1D2Q6PH85 259 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 C12orf40Q86WS4 652 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 ETFBKMTQ8IXQ9 262 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 ZNF687Q8N1G0 1237 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 EMC1Q8N766 993 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 DTWD2Q8NBA8 298 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 RXFP2Q8WXD0 754 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 PGAP3Q96FM1 320 aaPredicted RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 TBCBQ99426 244 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 IRX2Q9BZI1 471 aaPredicted RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 WDCPQ9H6R7 721 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 FBRSL1Q9HCM7 1045 aaKnown RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 ABHD10Q9NUJ1 306 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 PARVAQ9NVD7 372 aa14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 SPATA6Q9NWH7 488 aaPredicted RBP14.55□□□□□ -0.08
GTF3C3-206ENST00000448539 GOLGA6L7A0A1B0GV03 622 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 TBC1D3BA6NDS4 549 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 C2CD4BA6NLJ0 364 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 SIGLEC16A6NMB1 481 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 KCNU1A8MYU2 1149 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 KAT7O95251 611 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 GJB6O95452 261 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 PENKP01210 267 aaPredicted RBP14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 PLEKP08567 350 aaPredicted RBP14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 MYBL1P10243 752 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 GPD1P21695 349 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 RRM1P23921 792 aa14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 RDXP35241 583 aaKnown RBP14.54□□□□□ -0.08
GTF3C3-206ENST00000448539 EIF4A3P38919 411 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms