RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 FAM160B1Q5W0V3 765 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 USP17L6PQ6QN14 398 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 CRTC1Q6UUV9 634 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 KIAA0408Q6ZU52 694 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 FAM46DQ8NEK8 389 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 SMCR8Q8TEV9 937 aaPredicted RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 MAELQ96JY0 434 aaKnown RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 FCRL4Q96PJ5 515 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 PYM1Q9BRP8 204 aaKnown RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 ALG8Q9BVK2 526 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 DHX36Q9H2U1 1008 aaKnown RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 SERTAD4Q9NUC0 356 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 EHD3Q9NZN3 535 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 SH3BP4Q9P0V3 963 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 RGS17Q9UGC6 210 aaPredicted RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
VPS29-202ENST00000447578 BTBD3Q9Y2F9 522 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 SPATA31A3Q5VYP0 1347 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 ZBED9Q6R2W3 1325 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 ITIH6Q6UXX5 1313 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 ZNF521Q96K83 1311 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 BCORL1Q5H9F3 1711 aa4.69□□□□□ -1.66
VPS29-202ENST00000447578 DUOX2Q9NRD8 1548 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 A0A087WZ62 844 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 LOC102723971A0A1B0GUV8 181 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 B9A039 149 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 FCHO1O14526 889 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 COQ9O75208 318 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 USP1O94782 785 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 KIF20AO95235 890 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 CHEK2O96017 543 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 IFIT1P09914 478 aaKnown RBP4.68□□□□□ -1.66
VPS29-202ENST00000447578 CYP2D6P10635 497 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 CYP2C9P11712 490 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 TPH1P17752 444 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 ACVR2AP27037 513 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 KRT9P35527 623 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 CPT1AP50416 773 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 TUBA4AP68366 448 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 ARHGEF7Q14155 803 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 INSCQ1MX18 579 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 SUPT20HL1Q3ZLR7 823 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 RAP1GAP2Q684P5 730 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 PLAG1Q6DJT9 500 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 FAM180BQ6P0A1 224 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 KRBA2Q6ZNG9 492 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 KRT73Q86Y46 540 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 C2CD5Q86YS7 1000 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 CCDC89Q8N998 374 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 PSD4Q8NDX1 1056 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 SPPL3Q8TCT6 385 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 HDAC2Q92769 488 aaKnown RBP4.68□□□□□ -1.66
VPS29-202ENST00000447578 REPS1Q96D71 796 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 MOGAT1Q96PD6 335 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 OSBPL9Q96SU4 736 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 MLXIPQ9HAP2 919 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 SEPSECSQ9HD40 501 aaKnown RBP4.68□□□□□ -1.66
VPS29-202ENST00000447578 WASH6PQ9NQA3 447 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 XPNPEP3Q9NQH7 507 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 PRAG1Q86YV5 1406 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 ERBINQ96RT1 1412 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 TRAPPC8Q9Y2L5 1435 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 UNC13BO14795 1591 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 SPAG9O60271 1321 aaKnown RBP4.68□□□□□ -1.66
VPS29-202ENST00000447578 A2MP01023 1474 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 PLA2R1Q13018 1463 aa4.68□□□□□ -1.66
VPS29-202ENST00000447578 ZCCHC11Q5TAX3 1644 aaKnown RBP4.68□□□□□ -1.66
VPS29-202ENST00000447578 ABCC1P33527 1531 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 MYO5CQ9NQX4 1742 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 PLXNC1O60486 1568 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 TISP43B9A030 160 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 H7C4K7 107 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 hCG_1984214I3L0E3 225 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 SMIM22K7EJ46 135 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 ZNF213O14771 459 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 RNASEH2AO75792 299 aaKnown RBP4.67□□□□□ -1.66
VPS29-202ENST00000447578 FAM155BO75949 473 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 BMP15O95972 392 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 CD4P01730 458 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 GYS1P13807 737 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 NPPBP16860 134 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 NDUFB7P17568 137 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 EGR1P18146 543 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 CST5P28325 142 aaPredicted RBP4.67□□□□□ -1.66
VPS29-202ENST00000447578 ATICP31939 592 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 PTGER1P34995 402 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 ADD2P35612 726 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 RXRGP48443 463 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 PAPOLAP51003 745 aaKnown RBP4.67□□□□□ -1.66
VPS29-202ENST00000447578 WNT3P56703 355 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 BMPR2Q13873 1038 aa4.67□□□□□ -1.66
VPS29-202ENST00000447578 KCTD2Q14681 263 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms