RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PPP1R21Q6ZMI0 780 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 COLGALT2Q8IYK4 626 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 SLAIN1Q8ND83 568 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 IRGQQ8WZA9 623 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 MLXIPLQ9NP71 852 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMC6-206ENST00000446852 DNAJB4Q9UDY4 337 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 DCLK1O15075 740 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 OR4Q2P0C623 313 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 AIF1P55008 147 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 GEMIN4P57678 1058 aaKnown RBP18.04■□□□□ 0.48
SMC6-206ENST00000446852 CBLBQ13191 982 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 TP53INP2Q8IXH6 220 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 ANKRD42Q8N9B4 389 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 COLEC11Q9BWP8 271 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 PSMC3IPQ9P2W1 217 aaPredicted RBP18.04■□□□□ 0.48
SMC6-206ENST00000446852 SF3B1O75533 1304 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMC6-206ENST00000446852 HACD1B0YJ81 288 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 GRK4P32298 578 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PAFAH1B3Q15102 231 aaKnown RBP18.03■□□□□ 0.48
SMC6-206ENST00000446852 PRKD1Q15139 912 aaPredicted RBP18.03■□□□□ 0.48
SMC6-206ENST00000446852 RASA2Q15283 850 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 MAPRE1Q15691 268 aaKnown RBP18.03■□□□□ 0.48
SMC6-206ENST00000446852 LRRC8DQ7L1W4 858 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 SRLQ86TD4 932 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 DHRS4Q9BTZ2 278 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PPCSQ9HAB8 311 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PRDM16Q9HAZ2 1276 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PNPLA8Q9NP80 782 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 FETUBQ9UGM5 382 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PHF24Q9UPV7 400 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 RRP15Q9Y3B9 282 aaKnown RBP18.03■□□□□ 0.48
SMC6-206ENST00000446852 C4orf22Q6V702 233 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 ZNF534Q76KX8 674 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 TAC4Q86UU9 113 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 PAFAH2Q99487 392 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 RRN3Q9NYV6 651 aa18.03■□□□□ 0.48
SMC6-206ENST00000446852 SCN5AQ14524 2016 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 ARHGEF37A1IGU5 675 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 ANKRD65E5RJM6 399 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 TSHRP16473 764 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 OR1G1P47890 313 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 CXCR3P49682 368 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 NR1H3Q13133 447 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 GPNMBQ14956 572 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 BZW1Q7L1Q6 419 aaKnown RBP18.02■□□□□ 0.48
SMC6-206ENST00000446852 SCML4Q8N228 414 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 URGCPQ8TCY9 931 aa18.02■□□□□ 0.48
SMC6-206ENST00000446852 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
SMC6-206ENST00000446852 FRMD8Q9BZ67 464 aaPredicted RBP18.02■□□□□ 0.48
SMC6-206ENST00000446852 PRG3Q9Y2Y8 225 aaPredicted RBP18.02■□□□□ 0.48
SMC6-206ENST00000446852 A0A0A0MRY4 1105 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 TCRBV9S1A1TA0A576 114 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 NBNO60934 754 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 ERCC2P18074 760 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 KRT15P19012 456 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 ANKRD20A2Q5SQ80 823 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 ANKRD20A1Q5TYW2 823 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 ANKRD20A3Q5VUR7 823 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 ARHGEF18Q6ZSZ5 1173 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SPATA2LQ8IUW3 424 aaPredicted RBP18.01■□□□□ 0.47
SMC6-206ENST00000446852 LRRC34Q8IZ02 419 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 P2RY11Q96G91 374 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SPATA13Q96N96 652 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 TRABDQ9H4I3 376 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 PRDM12Q9H4Q4 367 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 PLAC1Q9HBJ0 212 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SNX10Q9Y5X0 201 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 F5H423 210 aaPredicted RBP18.01■□□□□ 0.47
SMC6-206ENST00000446852 TMEM189-UBE2V1I3L0A0 370 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 TNFRSF10BO14763 440 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 F9P00740 461 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SELPP16109 830 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 MAGEA3P43357 314 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 PGFP49763 221 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 VEGFBP49765 207 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 APLP1P51693 650 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SLC5A3P53794 718 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 AP1B1Q10567 949 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 IFRD2Q12894 506 aaPredicted RBP18.01■□□□□ 0.47
SMC6-206ENST00000446852 SEMA5AQ13591 1074 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 KLHL38Q2WGJ6 581 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 SLC39A12Q504Y0 691 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 DENND5BQ6ZUT9 1274 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 MCUQ8NE86 351 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 DQX1Q8TE96 717 aaKnown RBP18.01■□□□□ 0.47
SMC6-206ENST00000446852 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 TKTL2Q9H0I9 626 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 FAM169AQ9Y6X4 670 aa18.01■□□□□ 0.47
SMC6-206ENST00000446852 A0A1W2PPM1 405 aa18■□□□□ 0.47
SMC6-206ENST00000446852 RNF103O00237 685 aa18■□□□□ 0.47
SMC6-206ENST00000446852 SPAG7O75391 227 aa18■□□□□ 0.47
SMC6-206ENST00000446852 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
SMC6-206ENST00000446852 TPSB2P20231 275 aa18■□□□□ 0.47
SMC6-206ENST00000446852 MAP2K2P36507 400 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms