RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MSLNQ13421 630 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 SMU1Q2TAY7 513 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 MIER2Q8N344 545 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 AGAP3Q96P47 875 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ERVK-5Q9HDB9 667 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 MYH8P13535 1937 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 VAPBO95292 243 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 CUL2Q13617 745 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TUBA3EQ6PEY2 450 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TDRPQ86YL5 185 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 RAB43Q86YS6 212 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZDHHC18Q9NUE0 388 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 DNAJC28Q9NX36 388 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 LSM3P62310 102 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZIK1Q3SY52 487 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 NSUN4Q96CB9 384 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 LAMC1P11047 1609 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TFB1MQ8WVM0 346 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 RBBP8Q99708 897 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 SH3PXD2BA1X283 911 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZC3H11AO75152 810 aaKnown RBP eCLIP8.07□□□□□ -1.129e-7■■■■■ 28.2
SMG1-202ENST00000446231 ETFBP38117 255 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 PCDHGA3Q9Y5H0 932 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 PSMD3O43242 534 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 LYPLA1O75608 230 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 CCNKO75909 580 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ENO2P09104 434 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 CYP24A1Q07973 514 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ARMC7Q9H6L4 198 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 USE1Q9NZ43 259 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 DGKBQ9Y6T7 804 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZNF24P17028 368 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 NIPAL1Q6NVV3 410 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ANGPTL8Q6UXH0 198 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 C8orf59Q8N0T1 100 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 TTC39CQ8N584 583 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TMEM2Q9UHN6 1383 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 CEP250Q9BV73 2442 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TMEM191CA6NGB0 347 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 GH2P01242 217 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 EFL1Q7Z2Z2 1120 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 FSD1LQ9BXM9 530 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 PDK2Q15119 407 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 UTS2BQ765I0 119 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZNF410Q86VK4 478 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 PHF21AQ96BD5 680 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 GARTP22102 1010 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZNF829Q3KNS6 432 aaPredicted RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 PCDH20Q8N6Y1 951 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 PPHLN1Q8NEY8 458 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 RSPH1Q8WYR4 309 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 RCN3Q96D15 328 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 THUMPD3Q9BV44 507 aaKnown RBP8.07□□□□□ -1.12
SMG1-202ENST00000446231 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZBTB1Q9Y2K1 713 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 NME3Q13232 169 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ACMSDQ8TDX5 336 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 RMDN1Q96DB5 314 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 CITED4Q96RK1 184 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ASB3Q9Y575 518 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 HOXD12P35452 270 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 TYSND1Q2T9J0 566 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 STK32CQ86UX6 486 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 KBTBD8Q8NFY9 601 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 FADS3Q9Y5Q0 445 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 HTR3EA5X5Y0 456 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 KRT87PA6NCN2 255 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NOS1APO75052 506 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 BBS5Q8N3I7 341 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MINDY2Q8NBR6 621 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 TMEM143Q96AN5 459 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PNPOQ9NVS9 261 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MPOP05164 745 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MSX2P35548 267 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 COPZ1P61923 177 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MPP2Q14168 576 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 GRTP1Q5TC63 336 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PNMA8CA0A1B0GUJ8 204 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 TCRBV9S1A1TA0A576 114 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 HS6ST1O60243 411 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MYO1DO94832 1006 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 TAF5Q15542 800 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 C16orf46Q6P387 395 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 KLHL17Q6TDP4 642 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ANKRD13AQ8IZ07 590 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 HTRA1Q92743 480 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 LRPAP1P30533 357 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PRKAA2P54646 552 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 SLC44A1Q8WWI5 657 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 DOPEY2Q9Y3R5 2298 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms