RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CHRNA6Q15825 494 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 ASIC2Q16515 512 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 NADK2Q4G0N4 442 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 WWC2Q6AWC2 1192 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC5A5Q92911 643 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 GJA10Q969M2 543 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CPB2Q96IY4 423 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 GFM1Q96RP9 751 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 MTRQ99707 1265 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 GZF1Q9H116 711 aaPredicted RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 AASDHPPTQ9NRN7 309 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 SEL1LQ9UBV2 794 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 E2F3O00716 465 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 GOSR1O95249 250 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 RARGP13631 454 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TRIM27P14373 513 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 ACSL1P33121 698 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 MCM4P33991 863 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 RBMXP38159 391 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 NFE2Q16621 373 aaPredicted RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SFTPA1Q8IWL2 248 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 THAP4Q8WY91 577 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 RABGGTAQ92696 567 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PABPC3Q9H361 631 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 FAM13BQ9NYF5 915 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 MYO18AQ92614 2054 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PMS2P1A4D2B8 440 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 LARGE1O95461 756 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PPP4R3AQ6IN85 833 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PRPF39Q86UA1 669 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TRIM69Q86WT6 500 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TBC1D10CQ8IV04 446 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 ZBTB8OSQ8IWT0 167 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 OVCA2Q8WZ82 227 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 ARRDC3Q96B67 414 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 NACC1Q96RE7 527 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 RANBP9Q96S59 729 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC2A11Q9BYW1 496 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 DCLK3Q9C098 648 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PDZD7Q9H5P4 517 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 MRPL40Q9NQ50 206 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SMIM28A0A1B0GU29 152 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SSU72P8A0A1W2PR75 194 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 K7EM74 188 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 XPOTO43592 962 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 DUX1O43812 170 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 ODC1P11926 461 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SMSP52788 366 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 CDH8P55286 799 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 EMC2Q15006 297 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SEPT7Q16181 437 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNF776Q68DI1 518 aaPredicted RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC6A19Q695T7 634 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 NLGN4XQ8N0W4 816 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 NLGN4YQ8NFZ3 816 aaPredicted RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 LMX1AQ8TE12 382 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 BTN2A2Q8WVV5 523 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 VOPP1Q96AW1 172 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 TMEM184BQ9Y519 407 aaPredicted RBP6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
BRAFP1-201ENST00000445336 STAB1Q9NY15 2570 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 A0A0U1RQS6 177 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 ZSCAN5CA6NGD5 496 aaPredicted RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 NKX2-8O15522 239 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 DNTTP04053 509 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 NOS2P35228 1153 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 ARL2P36404 184 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 PSEN1P49768 467 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 LVRNQ6Q4G3 990 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 ZNF765Q7L2R6 523 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 MIER3Q7Z3K6 550 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 GPIHBP1Q8IV16 184 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 C4orf19Q8IY42 314 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 SNRNP40Q96DI7 357 aaKnown RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 SPATA17Q96L03 361 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 BDH2Q9BUT1 245 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 CCDC94Q9BW85 323 aaPredicted RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 CHMP4BQ9H444 224 aaKnown RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 STMN3Q9NZ72 180 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 CCDC168Q8NDH2 2452 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 IGFBP2P18065 325 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 HDCP19113 662 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 UGT1A3P35503 534 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 GALCP54803 685 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 RPS14P62263 151 aaKnown RBP6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 UGCGQ16739 394 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 MGAT5BQ3V5L5 792 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 LY6G5CQ5SRR4 150 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 OVOS1Q6IE37 1185 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 SLC25A23Q9BV35 468 aa6.77□□□□□ -1.33
BRAFP1-201ENST00000445336 TTLL2Q9BWV7 592 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms