RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 OR52L2PQ8NGH6 319 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 TRMT61AQ96FX7 289 aaKnown RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCDC17Q96LX7 622 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 PAGR1Q9BTK6 254 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 ELOVL1Q9BW60 279 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 CDCP1Q9H5V8 836 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 ITM2CQ9NQX7 267 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 FBXO28Q9NVF7 368 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 COX11Q9Y6N1 276 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 SPATA31A1Q5TZJ5 1347 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 SLC38A8A6NNN8 435 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 TISP43B9A030 160 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 BTBD19C9JJ37 291 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 POC1B-GALNT4F8VUJ3 575 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 SMIM22K7EJ46 135 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 KAT7O95251 611 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 SFPQP23246 707 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 CST5P28325 142 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 THBS4P35443 961 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 CDK7P50613 346 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 PRKAA2P54646 552 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 RPL15P61313 204 aaKnown RBP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 SF3A3Q12874 501 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 TAF5Q15542 800 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 ZRSR2Q15696 482 aaKnown RBP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 PRAMEF17Q5VTA0 474 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 FCRLBQ6BAA4 426 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 NFRKBQ6P4R8 1299 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 SERPINA13PQ6UXR4 307 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 ZNF788Q6ZQV5 615 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 DCDC5Q6ZRR9 648 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 RRAGAQ7L523 313 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 MOGAT3Q86VF5 341 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 ADGRG3Q86Y34 549 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 GALNT4Q8N4A0 578 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 ISCA1Q9BUE6 129 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCDC134Q9H6E4 229 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 LUZP4Q9P127 313 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 PTGFRNQ9P2B2 879 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 NFU1Q9UMS0 254 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 LZTS1Q9Y250 596 aa5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 UBE2J1Q9Y385 318 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P6-201ENST00000444896 B9A039 149 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 H0Y3Z8 333 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 PRYO14603 147 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 NKX2-8O15522 239 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 CYP21A2P08686 494 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 MATN1P21941 496 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 AGTR2P50052 363 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 FOXL2P58012 376 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 WDR5P61964 334 aaKnown RBP5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 NHLH1Q02575 133 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC14A1Q13336 389 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 GALNTL6Q49A17 601 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 TMEM119Q4V9L6 283 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 TMEM63BQ5T3F8 832 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 ANKRD40Q6AI12 368 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 SUMO4Q6EEV6 95 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 TMEM65Q6PI78 240 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 RAB11FIP2Q7L804 512 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 HMGB4Q8WW32 186 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 RILPL2Q969X0 211 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 REXO5Q96IC2 774 aaKnown RBP5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 TRAPPC9Q96Q05 1148 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 FYTTD1Q96QD9 318 aaKnown RBP5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 ADGRE3Q9BY15 652 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 ABHD16BQ9H3Z7 469 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 ELAC1Q9H777 363 aaKnown RBP5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 RAB21Q9UL25 225 aa5.15□□□□□ -1.59
HMGB3P6-201ENST00000444896 WIPF3A6NGB9 483 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 HMX3A6NHT5 357 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 EFCAB8A8MWE9 144 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 PRRT4C9JH25 899 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 GCATO75600 419 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 LARGE1O95461 756 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 ARL4CP56559 192 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 TUBA4AP68366 448 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 CUL4BQ13620 913 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 KCNB1Q14721 858 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 C4orf46Q504U0 113 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 DPY19L2P1Q6NXN4 242 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 LAS2Q8IYD9 372 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 PNLDC1Q8NA58 520 aaKnown RBP5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 MYRIPQ8NFW9 859 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 SEMA6DQ8NFY4 1073 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 OR6Y1Q8NGX8 325 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 CSGALNACT1Q8TDX6 532 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 AKAP1Q92667 903 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 DPF1Q92782 380 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 FAR2Q96K12 515 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 HS6ST2Q96MM7 605 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 GATA5Q9BWX5 397 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 BRD8Q9H0E9 1235 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 TRPC5Q9UL62 973 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 C19orf53Q9UNZ5 99 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC12A4Q9UP95 1085 aa5.14□□□□□ -1.59
HMGB3P6-201ENST00000444896 B3GNT3Q9Y2A9 372 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms