RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 SFTPA1Q8IWL2 248 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 RPLP0P6Q8NHW5 317 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 CLDN23Q96B33 292 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 CFAP57Q96MR6 1250 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 TBCBQ99426 244 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 DDX50Q9BQ39 737 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 FAM86C1Q9NVL1 165 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 TAS2R14Q9NYV8 317 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 XPO7Q9UIA9 1087 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 CAPN11Q9UMQ6 739 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
SLC48A1-202ENST00000442892 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TBL1XO60907 577 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 SLC6A4P31645 630 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 CCR1P32246 355 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TIE1P35590 1138 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 GGCXP38435 758 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 DGKGP49619 791 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 PTPN5P54829 565 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 MESP2Q0VG99 397 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 NNTQ13423 1086 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TRIM14Q14142 442 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 MPPE1Q53F39 396 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ADGRF1Q5T601 910 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 RAP1GAP2Q684P5 730 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 PHF13Q86YI8 300 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ATOH1Q92858 354 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 PRRX2Q99811 253 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 ZNHIT6Q9NWK9 470 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
SLC48A1-202ENST00000442892 WDFY4Q6ZS81 3184 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 F5H5T6 163 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 AP5Z1O43299 807 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 CACNG3O60359 315 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 LATS1O95835 1130 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SERPING1P05155 500 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SLC2A3P11169 496 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 KRT3P12035 628 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PDGFRAP16234 1089 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SDC4P31431 198 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SCNN1AP37088 669 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 EIF2DP41214 584 aaKnown RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PRKCIP41743 596 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 GRIA2P42262 883 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SGSHP51688 502 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SATB1Q01826 763 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 C15orf59Q2T9L4 293 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 FYB2Q5VWT5 728 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 NADSYN1Q6IA69 706 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PKN3Q6P5Z2 889 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 DCUN1D2Q6PH85 259 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 ETFBKMTQ8IXQ9 262 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 MCOLN2Q8IZK6 566 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 CFAP52Q8N1V2 620 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 JOSD2Q8TAC2 188 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 ZNF653Q96CK0 615 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 BTN2A3PQ96KV6 586 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 MCEEQ96PE7 176 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 PIGVQ9NUD9 493 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 RRN3Q9NYV6 651 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 MYO1AQ9UBC5 1043 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 SLC8A2Q9UPR5 921 aa12.66□□□□□ -0.38
SLC48A1-202ENST00000442892 ANTXRLA6NF34 631 aa12.65□□□□□ -0.38
SLC48A1-202ENST00000442892 K7EQS6 105 aa12.65□□□□□ -0.38
SLC48A1-202ENST00000442892 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■■■ 31.8
SLC48A1-202ENST00000442892 KLF8O95600 359 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms