RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
NR1I3-211ENST00000442691 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 APOL1O14791 398 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 NCAM2O15394 837 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 RAD51CO43502 376 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 LIASO43766 372 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FGF19O95750 216 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ATF6P18850 670 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HOXA9P31269 272 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HOXC13P31276 330 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 CCR1P32246 355 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ELF1P32519 619 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 GJC1P36383 396 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ALDH1A3P47895 512 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 CAV1Q03135 178 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 DUSP4Q13115 394 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PTK6Q13882 451 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 OASLQ15646 514 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PABPC1LQ4VXU2 614 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 DUPD1Q68J44 220 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FAM117BQ6P1L5 589 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PDZD4Q76G19 769 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 CCDC105Q8IYK2 499 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 BBOF1Q8ND07 529 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HSPH1Q92598 858 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 B3GALT6Q96L58 329 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 BRD8Q9H0E9 1235 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 WDCPQ9H6R7 721 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ARFGAP3Q9NP61 516 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PIGVQ9NUD9 493 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 ARHGEF38Q9NXL2 777 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 NAALADL1Q9UQQ1 740 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 HBS1LQ9Y450 684 aaKnown RBP9.42□□□□□ -0.9
NR1I3-211ENST00000442691 YIPF1Q9Y548 306 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
NR1I3-211ENST00000442691 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 A0A1W2PQH9 124 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 LINC01553A4QN01 128 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PI4K2BG5E9Z4 385 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 MCF2LO15068 1137 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 FGF10O15520 208 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 CST8O60676 142 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 IGLV3-27P01718 113 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 CTNNB1P35222 781 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 SERPINB6P35237 376 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PTGIRP43119 386 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 EPHB3P54753 998 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ARPP19P56211 112 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 NOMO1Q15155 1222 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ANKRD20A8PQ5CZ79 823 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 KCNT1Q5JUK3 1230 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 NUGGCQ68CJ6 796 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 AADACL2Q6P093 401 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 LILRA6Q6PI73 481 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ELMSAN1Q6PJG2 1045 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 TMCO3Q6UWJ1 677 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 CCNI2Q6ZMN8 369 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 FAM131BQ86XD5 332 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 RFX6Q8HWS3 928 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 LRRC49Q8IUZ0 686 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 KLHL7Q8IXQ5 586 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms