RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 FNDC8Q8TC99 324 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 USP6NLQ92738 828 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 KCNN1Q92952 543 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 ACSF2Q96CM8 615 aaPredicted RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 CCDC124Q96CT7 223 aaKnown RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 FAM84AQ96KN4 292 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 MMP19Q99542 508 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 PCDH18Q9HCL0 1135 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 XAB2Q9HCS7 855 aaKnown RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 SAE1Q9UBE0 346 aaPredicted RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 CNTN6Q9UQ52 1028 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 APOBEC2Q9Y235 224 aaKnown RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 ARID2Q68CP9 1835 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 FAM189A1O60320 539 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 CRTAMO95727 393 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 C4BPAP04003 597 aaKnown RBP12.27□□□□□ -0.45
LTBR-203ENST00000441074 OSBPP22059 807 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 HDAC4P56524 1084 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 MYBPC1Q00872 1141 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 PLOD1Q02809 727 aaPredicted RBP12.27□□□□□ -0.45
LTBR-203ENST00000441074 DPYSL3Q14195 570 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 KCTD2Q14681 263 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 CNGA3Q16281 694 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 KLHL35Q6PF15 583 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 BBS12Q6ZW61 710 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 TMEM126BQ8IUX1 230 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 UNC45BQ8IWX7 931 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 TAB3Q8N5C8 712 aaPredicted RBP12.27□□□□□ -0.45
LTBR-203ENST00000441074 PPM1NQ8N819 430 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 HIPK4Q8NE63 616 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 TMEM143Q96AN5 459 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 CMTM5Q96DZ9 223 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 SLC13A1Q9BZW2 595 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 ARHGAP28Q9P2N2 729 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 ZNF232Q9UNY5 417 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 PCDHB4Q9Y5E5 795 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 AK5Q9Y6K8 562 aa12.27□□□□□ -0.45
LTBR-203ENST00000441074 TCRBV5S1A1TA0A578 114 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 SIN3BO75182 1162 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CALB1P05937 261 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 PSAPP07602 524 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ATP6V1B1P15313 513 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ITGAXP20702 1163 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ACAT1P24752 427 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 CRHR1P34998 444 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CD97P48960 835 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 LIG4P49917 911 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 GTF2A2P52657 109 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 DYNLT1P63172 113 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 BASP1P80723 227 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 OGDHQ02218 1023 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TAP1Q03518 808 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TMEM62Q0P6H9 643 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TDRD10Q5VZ19 366 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 HPS6Q86YV9 775 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CROCCP3Q8IVE0 287 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CTAGE3PQ8IX95 158 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 DEFB107AQ8IZN7 70 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CATSPER1Q8NEC5 780 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 PIWIL2Q8TC59 973 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 SNRNP27Q8WVK2 155 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ZNF668Q96K58 619 aaPredicted RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 PCYT2Q99447 389 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 APOL6Q9BWW8 343 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 MRPL1Q9BYD6 325 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 FAIMQ9NVQ4 179 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 FBXO40Q9UH90 709 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 PAIP2BQ9ULR5 123 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TTLL3Q9Y4R7 772 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CEPT1Q9Y6K0 416 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 E9PBE3 544 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 MAFGO15525 162 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 CST8O60676 142 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 FARP2O94887 1054 aaPredicted RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 MYL4P12829 197 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TNNI1P19237 187 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 MTTPP55157 894 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 LPIN1Q14693 890 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 DNAJC24Q6P3W2 148 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 DCUN1D2Q6PH85 259 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 TRIM67Q6ZTA4 783 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 ERI1Q8IV48 349 aaKnown RBP12.26□□□□□ -0.45
LTBR-203ENST00000441074 BBS5Q8N3I7 341 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 NIPA2Q8N8Q9 360 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 RSPH1Q8WYR4 309 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 MCEEQ96PE7 176 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms