RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 IL18RAPO95256 599 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 STAU1O95793 577 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 MMEP08473 750 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ACO1P21399 889 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 RPL21P46778 160 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NOMO3P69849 1222 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PDCLQ13371 301 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PIGHQ14442 188 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 STAT4Q14765 748 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 DNAJB7Q7Z6W7 309 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 GPR149Q86SP6 731 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SLC47A2Q86VL8 602 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TTC30AQ86WT1 665 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NT5DC4Q86YG4 428 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CACNA2D3Q8IZS8 1091 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ANKS4BQ8N8V4 417 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TTC13Q8NBP0 860 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CFAP61Q8NHU2 1237 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CYFIP2Q96F07 1278 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CHMP6Q96FZ7 201 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PCED1BQ96HM7 432 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF560Q96MR9 790 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 GDAP1L1Q96MZ0 367 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 XPO6Q96QU8 1125 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TSPAN18Q96SJ8 248 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 RTP3Q9BQQ7 232 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SYT15Q9BQS2 421 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PRKD2Q9BZL6 878 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 FOXQ1Q9C009 403 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NACA2Q9H009 215 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 LHX5Q9H2C1 402 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ASAH2Q9NR71 780 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 HEBP1Q9NRV9 189 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SEPT11Q9NVA2 429 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 POLR3BQ9NW08 1133 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NEU2Q9Y3R4 380 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 C2CD2Q9Y426 696 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 MYO18AQ92614 2054 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 FRYQ5TBA9 3013 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF487B1APH4 448 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 H7C4K7 107 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RGS16O15492 202 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DCXO43602 365 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 XYLBO75191 536 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DNAJC8O75937 253 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 VNN1O95497 513 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 VNN2O95498 520 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CKMP06732 381 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 HMBSP08397 361 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RARAP10276 462 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PYGMP11217 842 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KRT5P13647 590 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 HOXB8P17481 243 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NDST1P52848 882 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MAP3K7CLP57077 242 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NOP14P78316 857 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ACTN3Q08043 901 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KCNC3Q14003 757 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MESDQ14696 234 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SGO2Q562F6 1265 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SWT1Q5T5J6 900 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TANGO2Q6ICL3 276 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MMS22LQ6ZRQ5 1243 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC105Q8IYK2 499 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MYLPFQ96A32 169 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 HEXIM2Q96MH2 286 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 UROC1Q96N76 676 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TWNKQ96RR1 684 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DCLK3Q9C098 648 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SDCBP2Q9H190 292 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 VRTNQ9H8Y1 702 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PRDM16Q9HAZ2 1276 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF334Q9HCZ1 680 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PLSCR2Q9NRY7 297 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM30AQ9NV96 361 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 GTSE1Q9NYZ3 720 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 FBXW11Q9UKB1 542 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PCDHB8Q9UN66 801 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CCL26Q9Y258 94 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NME7Q9Y5B8 376 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MYOFQ9NZM1 2061 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CLUHO75153 1309 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 C2orf16Q68DN1 1984 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SYNJ2BP-COX16A0A087WUM0 186 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 C2orf78A6NCI8 922 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ANTXRLA6NF34 631 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CFAP73A6NFT4 308 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DPYSL4O14531 572 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RASGRF2O14827 1237 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MDM4O15151 490 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MED7O43513 233 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PI15O43692 258 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 FAM155BO75949 473 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 BEST1O76090 585 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TJP3O95049 919 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TBX18O95935 607 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms