RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 POPDC2Q9HBU9 364 aa12.79□□□□□ -0.36
SLC38A1-202ENST00000439706 TMCO1Q9UM00 188 aa12.79□□□□□ -0.36
SLC38A1-202ENST00000439706 HES2Q9Y543 173 aa12.79□□□□□ -0.36
SLC38A1-202ENST00000439706 KLHL2O95198 593 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 GBE1Q04446 702 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 EMC2Q15006 297 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 MAPK15Q8TD08 544 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 PCDHAC1Q9H158 963 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 MFHAS1Q9Y4C4 1052 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 CHRNGP07510 517 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 SLC5A2P31639 672 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 CAP2P40123 477 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 ART3Q13508 389 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 RARS2Q5T160 578 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 MAP3K21Q5TCX8 1036 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 ATP6V0A1Q93050 837 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 RCN3Q96D15 328 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 PRICKLE1Q96MT3 831 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 TRPV6Q9H1D0 765 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 PTPN1P18031 435 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 GARTP22102 1010 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 CHRNA5P30532 468 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 MYBPC1Q00872 1141 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 MS4A2Q01362 244 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 NPAS2Q99743 824 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 PKP2Q99959 881 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 GPAMQ9HCL2 828 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
SLC38A1-202ENST00000439706 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 E7ESA3 106 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.365e-6■□□□□ 9.7
SLC38A1-202ENST00000439706 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 DGAT1O75907 488 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 NR3C2P08235 984 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 AVPR1AP37288 418 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 DACT2Q5SW24 774 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 SLC9A4Q6AI14 798 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 UTS2BQ765I0 119 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 LRRC43Q8N309 656 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 C7orf31Q8N865 590 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 RIN3Q8TB24 985 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 NLRP4Q96MN2 994 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 FAM210AQ96ND0 272 aa12.77□□□□□ -0.36
SLC38A1-202ENST00000439706 KIF13BQ9NQT8 1826 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 NDC80O14777 642 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 MGAT1P26572 445 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 NAA20P61599 178 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 IGBP1P78318 339 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 WASHC5Q12768 1159 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 CCNYL1Q8N7R7 359 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 Q9H521 79 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 ARMC7Q9H6L4 198 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 UBIAD1Q9Y5Z9 338 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 NHSQ6T4R5 1651 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 ANKRD12Q6UB98 2062 aa12.77□□□□□ -0.37
SLC38A1-202ENST00000439706 INO80B-WBP1J3KQ70 363 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF189O75820 626 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 ALDOAP04075 364 aaKnown RBP12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 ICAM1P05362 532 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 FGF3P11487 239 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 AOC1P19801 751 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 ACTR2P61160 394 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 KRT76Q01546 638 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 KCNJ11Q14654 390 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 CCDC142Q17RM4 750 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 KLHL35Q6PF15 583 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 LPCAT2Q7L5N7 544 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 PLD6Q8N2A8 252 aaKnown RBP12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 ATP6V1E2Q96A05 226 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 LGMNQ99538 433 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 B3GNT5Q9BYG0 378 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
SLC38A1-202ENST00000439706 H3BNX3 289 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms