RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-204ENST00000438964 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 IL31Q6EBC2 164 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 TRIM72Q6ZMU5 477 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 C1orf21Q9H246 121 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 EHMT1Q9H9B1 1298 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 DNAJB4Q9UDY4 337 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 USP18Q9UMW8 372 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 TCRBV5S1A1TA0A578 114 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 PLOD2O00469 737 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 EXTL3O43909 919 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 FBXO21O94952 628 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 CALB1P05937 261 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 SOX11P35716 441 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 SLC9A4Q6AI14 798 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 ZNF554Q86TJ5 538 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 FAM110BQ8TC76 370 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-204ENST00000438964 CAB39LQ9H9S4 337 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 CYP26B1Q9NR63 512 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 DDX56Q9NY93 547 aaKnown RBP13.79□□□□□ -0.2
ACTN1-204ENST00000438964 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
ACTN1-204ENST00000438964 ENTPD3O75355 529 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 BBOX1O75936 387 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 ZBED1O96006 694 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 APOC2P02655 101 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 ERBB2P04626 1255 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 FAM58BPP0C7Q3 252 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 COL6A2P12110 1019 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
ACTN1-204ENST00000438964 CD300CQ08708 224 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 FSTL1Q12841 308 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 PCLAFQ15004 111 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 LPCAT2Q7L5N7 544 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 RCN3Q96D15 328 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 WRNIP1Q96S55 665 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 INIPQ9NRY2 104 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 FETUBQ9UGM5 382 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 EBF1Q9UH73 591 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 CHRNGP07510 517 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 CCDC166P0CW27 439 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 THRAP10827 490 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 MAGEA8P43361 318 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
ACTN1-204ENST00000438964 HHIPL2Q6UWX4 724 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 PQLC3Q8N755 202 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 VCPIP1Q96JH7 1222 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 KLHL32Q96NJ5 620 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 PCDHAC1Q9H158 963 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
ACTN1-204ENST00000438964 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
ACTN1-204ENST00000438964 DPP6P42658 865 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 KLF10Q13118 480 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.2
ACTN1-204ENST00000438964 FAM102AQ5T9C2 384 aaPredicted RBP13.77□□□□□ -0.2
ACTN1-204ENST00000438964 LGSNQ5TDP6 509 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 CYP2R1Q6VVX0 501 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 PLD6Q8N2A8 252 aaKnown RBP13.77□□□□□ -0.2
ACTN1-204ENST00000438964 MARVELD2Q8N4S9 558 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 ATP6V1E2Q96A05 226 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 NGRNQ9NPE2 291 aaKnown RBP13.77□□□□□ -0.2
ACTN1-204ENST00000438964 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 MFHAS1Q9Y4C4 1052 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 ANKRD12Q6UB98 2062 aa13.77□□□□□ -0.2
ACTN1-204ENST00000438964 GOLGA8TH3BQL2 631 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 KLHL2O95198 593 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 TNFAIP8O95379 198 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 ERVK-10P10266 1014 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 RGS7P49802 495 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 MTTPP55157 894 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CA9Q16790 459 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 NUP93Q8N1F7 819 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
ACTN1-204ENST00000438964 GIPC3Q8TF64 312 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 EME1Q96AY2 570 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 RMDN3Q96TC7 470 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 NPAS2Q99743 824 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CCDC28BQ9BUN5 200 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 C7orf72A4D263 438 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 PHKA2P46019 1235 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 RXRGP48443 463 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 NDST2P52849 883 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 IGBP1P78318 339 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 ATP1A4Q13733 1029 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CEACAM7Q14002 265 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms