RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 C3orf70A6NLC5 250 aaPredicted RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TMEM232C9JQI7 657 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FYB1O15117 783 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 PRAMEF2O60811 474 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 RPP40O75818 363 aaKnown RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ALADP13716 330 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 GYS1P13807 737 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 THBS4P35443 961 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 WDR5P61964 334 aaKnown RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 NHLH1Q02575 133 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TLE3Q04726 772 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 SF3A3Q12874 501 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 PPFIA1Q13136 1202 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 RAPGEF1Q13905 1077 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 AAK1Q2M2I8 961 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ADCK5Q3MIX3 580 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ANKRD45Q5TZF3 282 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 PRAMEF17Q5VTA0 474 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TMEM88Q6PEY1 159 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 RANBP10Q6VN20 620 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 RD3Q7Z3Z2 195 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ADGRG3Q86Y34 549 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ANKRD18AQ8IVF6 992 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 OR4N4Q8N0Y3 316 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 CPXCR1Q8N123 301 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ADPRHL1Q8NDY3 354 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 HASPINQ8TF76 798 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 AKAP1Q92667 903 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 C3orf49Q96BT1 292 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 KAZALD1Q96I82 304 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ASB2Q96Q27 587 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 MACROD1Q9BQ69 325 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 VPS16Q9H269 839 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 ASIC5Q9NY37 505 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 VPS4AQ9UN37 437 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 PCDHB2Q9Y5E7 798 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 AOX1Q06278 1338 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SPATA31A6Q5VVP1 1343 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3DA0A087WVF3 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3IA0A087WXS9 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3EA0A087X179 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3KA0A087X1G2 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3BA6NDS4 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3FA6NER0 549 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 MBD3L5A6NJ08 208 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 KIF28PB7ZC32 967 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3LB9A6J9 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SMIM22K7EJ46 135 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 IPO5O00410 1097 aaKnown RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PIP5K1CO60331 668 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PPP6R2O75170 966 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PPFIA2O75334 1257 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM155BO75949 473 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 C1QL1O75973 258 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 RNF8O76064 485 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 CYP3A4P08684 503 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3HP0C7X1 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 ATF7P17544 494 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SLC8A1P32418 973 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 GRK5P34947 590 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 HOXD12P35452 270 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PCP4P48539 62 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PTH2RP49190 550 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 RAE1P78406 368 aaKnown RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 POSTNQ15063 836 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TIGD6Q17RP2 521 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM110CQ1W6H9 321 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PROSER3Q2NL68 480 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 BTBD16Q32M84 506 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 CC2D1BQ5T0F9 858 aaKnown RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 KIAA1614Q5VZ46 1190 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 ANKRD40Q6AI12 368 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3GQ6DHY5 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3CQ6IPX1 549 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 JMJD6Q6NYC1 403 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 LDHAL6AQ6ZMR3 332 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PRIMA1Q86XR5 153 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TBC1D3Q8IZP1 549 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PNLDC1Q8NA58 520 aaKnown RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 MYRIPQ8NFW9 859 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 OR1N1Q8NGS0 311 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SCAMP5Q8TAC9 235 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 PPM1EQ8WY54 764 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 NPIPB3Q92617 1050 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 ZNF764Q96H86 408 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 TRIM2Q9C040 744 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 NUAK2Q9H093 628 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SLITRK6Q9H5Y7 841 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 MLXIPQ9HAP2 919 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms