RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 TRIM50Q86XT4 487 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 NDUFAF2Q8N183 169 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 DCUN1D1Q96GG9 259 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 MRPL4Q9BYD3 311 aaKnown RBP12.76□□□□□ -0.37
TMEM116-202ENST00000437003 MRPL1Q9BYD6 325 aaKnown RBP12.76□□□□□ -0.37
TMEM116-202ENST00000437003 SIRPGQ9P1W8 387 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 DNAJC16Q9Y2G8 782 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 LRCH4O75427 683 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 KRT37O76014 449 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 SNRPAP09012 282 aaKnown RBP12.76□□□□□ -0.37
TMEM116-202ENST00000437003 AOC1P19801 751 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-202ENST00000437003 BAG6P46379 1132 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 AP3M2P53677 418 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 PSMC1P62191 440 aaKnown RBP12.76□□□□□ -0.37
TMEM116-202ENST00000437003 VWA5B1Q5TIE3 1220 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 FAM160B1Q5W0V3 765 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 C16orf46Q6P387 395 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 RFX6Q8HWS3 928 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 TRIM42Q8IWZ5 723 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
TMEM116-202ENST00000437003 TCRBV5S1A1TA0A578 114 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 FZD9O00144 591 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 NDC80O14777 642 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 CCNT2O60583 730 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 MSCO60682 206 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SUPT3HO75486 399 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 RBP3P10745 1247 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 EFNA5P52803 228 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ATXN3P54252 364 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 EIF3EP60228 445 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 DPYSL3Q14195 570 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 TBCCQ15814 346 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 DUOXA2Q1HG44 320 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 KCTD6Q8NC69 237 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 EPB41L1Q9H4G0 881 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 APOBEC2Q9Y235 224 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 AK5Q9Y6K8 562 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SF3B1O75533 1304 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SIN3BO75182 1162 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 RFPL1O75677 317 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 MAP3K6O95382 1288 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 MSX2P35548 267 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 NPNTQ6UXI9 565 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 WDR75Q8IWA0 830 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ARFGAP1Q8N6T3 406 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 NLRP4Q96MN2 994 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 MYO18AQ92614 2054 aaKnown RBP12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LCTP09848 1927 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 H3BNX3 289 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 H3BSA7 217 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 FAM189A1O60320 539 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 DNAJA2O60884 412 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LY6KQ17RY6 165 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 LRRC38Q5VT99 294 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 UBR7Q8N806 425 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 PPP1R16BQ96T49 567 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 SMYD2Q9NRG4 433 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 CIDEBQ9UHD4 219 aa12.75□□□□□ -0.37
TMEM116-202ENST00000437003 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 A0A1B0GTW7 788 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 C3orf70A6NLC5 250 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-202ENST00000437003 OGTO15294 1046 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 BPGMP07738 259 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 ITGAXP20702 1163 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 SLC5A2P31639 672 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 LAMTOR4Q0VGL1 99 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
TMEM116-202ENST00000437003 DCTN2Q13561 401 aaKnown RBP12.74□□□□□ -0.37
TMEM116-202ENST00000437003 FRMD7Q6ZUT3 714 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms