RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RTN3O95197 1032 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 C1RP00736 705 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 LTFP02788 710 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 TCF4P15884 667 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 RHOQP17081 205 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PSMA2P25787 234 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 YWHAQP27348 245 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 GSTT1P30711 240 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 ELF1P32519 619 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 MATKP42679 507 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC1A1P43005 524 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PTPN9P43378 593 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PEX5P50542 639 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 YWHAGP61981 247 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PITX1P78337 314 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 AMPD2Q01433 879 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 TWF1Q12792 350 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 TAF10Q12962 218 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 LBRQ14739 615 aaKnown RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 C15orf59Q2T9L4 293 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 DCAF6Q58WW2 860 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 TTC39BQ5VTQ0 682 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 OTUD1Q5VV17 481 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 CC2D1AQ6P1N0 951 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 BEND5Q7L4P6 421 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PEX26Q7Z412 305 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 BNIPLQ7Z465 357 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 ADGRD2Q7Z7M1 963 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 KIF18AQ8NI77 898 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC7A14Q8TBB6 771 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 CENPIQ92674 756 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 KRT35Q92764 455 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 NT5C3BQ969T7 300 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 FAM149B1Q96BN6 582 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 MYRFLQ96LU7 910 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 NPY6RQ99463 290 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 NAPGQ99747 312 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 CNPY3Q9BT09 278 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 TTLL2Q9BWV7 592 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 LMAN2LQ9H0V9 348 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 FBXO44Q9H4M3 255 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 POPDC2Q9HBU9 364 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 CUEDC1Q9NWM3 386 aaPredicted RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 GMIPQ9P107 970 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 LCMT1Q9UIC8 334 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 FBXW11Q9UKB1 542 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 AMFRQ9UKV5 643 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 SNX12Q9UMY4 172 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 EREGO14944 169 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 SPOPO43791 374 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 SRGAP2O75044 1071 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 LRCH4O75427 683 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ENDOD1O94919 500 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 GLUD1P00367 558 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 F11P03951 625 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 C8AP07357 584 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ZDHHC11BP0C7U3 371 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 NCAM1P13591 858 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 EPCAMP16422 314 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 PRLRP16471 622 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CES1P23141 567 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CTNNA2P26232 953 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 IL1R2P27930 398 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 SDC4P31431 198 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CTNNA1P35221 906 aaKnown RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 MARCKSL1P49006 195 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 HDAC4P56524 1084 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ATP11AP98196 1134 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 MLLT1Q03111 559 aaPredicted RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ACAP1Q15027 740 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 RPS6KA1Q15418 735 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 SLC25A52Q3SY17 297 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 DNTTIP2Q5QJE6 756 aaKnown RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 TXNRD3NBQ6F5E7 133 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 NXPE4Q6UWF7 544 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CCDC149Q6ZUS6 474 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CYP4V2Q6ZWL3 525 aaPredicted RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ERMP1Q7Z2K6 904 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 DNAJB7Q7Z6W7 309 aaPredicted RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 TMEM150AQ86TG1 271 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 RBM23Q86U06 439 aaKnown RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 COG1Q8WTW3 980 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM172AQ8WUF8 416 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 ALG3Q92685 438 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 TBCBQ99426 244 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 LRRC3Q9BY71 257 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 MAGED2Q9UNF1 606 aaPredicted RBP7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 PCDHGB7Q9Y5F8 929 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 PCDHA3Q9Y5H8 950 aa7.33□□□□□ -1.24
LSM3P3-201ENST00000436601 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF840PA6NDX5 716 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 MIF4GDA9UHW6 222 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms