RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 SEC23AQ15436 765 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 TRIM65Q6PJ69 517 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 SV2AQ7L0J3 742 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 DET1Q7L5Y6 550 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 RHPN2P1A8MT19 583 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 RASGRP1O95267 797 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 CASP7P55210 303 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 LPAL2Q16609 132 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-203ENST00000434735 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 RASA4BC9J798 803 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 RASA4O43374 803 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 PFKMP08237 780 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 ALDH9A1P49189 494 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 BRSK2Q8IWQ3 736 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 ADSSL1Q8N142 457 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 EXD1Q8NHP7 514 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 CCDC90BQ9GZT6 254 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-203ENST00000434735 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
UBE3B-203ENST00000434735 SCAMP1O15126 338 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 MICAL2O94851 1124 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 MMEP08473 750 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 KELP23276 732 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 C16orf72Q14CZ0 275 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 LENG9Q96B70 501 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 DPEP2Q9H4A9 486 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CA14Q9ULX7 337 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 TCF3P15923 654 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 NOS2P35228 1153 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SKOR1P84550 965 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CAPSQ13938 189 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SUZ12Q15022 739 aaKnown RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 KCNT2Q6UVM3 1135 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ZSCAN18Q8TBC5 510 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CEP41Q9BYV8 373 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CDT1Q9H211 546 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 NMRK1Q9NWW6 199 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 PAK5Q9P286 719 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 PSEN1P49768 467 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 LRRC32Q14392 662 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 FAM47EQ6ZV65 393 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 POF1BQ8WVV4 589 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ZBTB10Q96DT7 871 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SNF8Q96H20 258 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 FAM32AQ9Y421 112 aaKnown RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 UBIAD1Q9Y5Z9 338 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ATG13O75143 517 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 ENO2P09104 434 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 COLEC12Q5KU26 742 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CHST9Q7L1S5 443 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 B4GALNT2Q8NHY0 566 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 CYTH2Q99418 400 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 RPS6KB2Q9UBS0 482 aa12.48□□□□□ -0.41
UBE3B-203ENST00000434735 RUVBL2Q9Y230 463 aaKnown RBP12.48□□□□□ -0.41
UBE3B-203ENST00000434735 SLC31A1O15431 190 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CARSP49589 748 aaKnown RBP12.47□□□□□ -0.41
UBE3B-203ENST00000434735 NCAPHQ15003 741 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 MAPRE2Q15555 327 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 YY1AP1Q9H869 796 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CNTNAP1P78357 1384 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CYP4F8P98187 520 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-203ENST00000434735 TATDN2Q93075 761 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 PRPF18Q99633 342 aaKnown RBP12.47□□□□□ -0.41
UBE3B-203ENST00000434735 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 RRN3Q9NYV6 651 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CHUKO15111 745 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 PLA2G6O60733 806 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 OR56A5P0C7T3 313 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 KRT4P19013 534 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 TAF10Q12962 218 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 TATDN1Q6P1N9 297 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 GLT6D1Q7Z4J2 308 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 RNF112Q9ULX5 631 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 H3BM21 787 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 CLDN5O00501 218 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 INPP4BO15327 924 aa12.47□□□□□ -0.41
UBE3B-203ENST00000434735 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms