RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 DUSP16Q9BY84 665 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 IL25Q9H293 177 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 NLRC4Q9NPP4 1024 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CNGB3Q9NQW8 809 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ASNSD1Q9NWL6 643 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GDAP2Q9NXN4 497 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 DNPEPQ9ULA0 475 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 STARD13Q9Y3M8 1113 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TELO2Q9Y4R8 837 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 MUC6Q6W4X9 2439 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 H3BRJ5 948 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TULP3O75386 442 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 NOL4O94818 638 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TRIM49P0CI25 452 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TRIM49CP0CI26 452 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 HALP42357 657 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ILF3Q12906 894 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 IFI16Q16666 785 aaKnown RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CDO1Q16878 200 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZNF658Q5TYW1 1059 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KRBA2Q6ZNG9 492 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 TAF8Q7Z7C8 310 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SKAP1Q86WV1 359 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 MLKLQ8NB16 471 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KCNE4Q8WWG9 221 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 EDEM1Q92611 657 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 HAUS1Q96CS2 278 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GDAP1L1Q96MZ0 367 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 PAAF1Q9BRP4 392 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 SLC46A2Q9BY10 475 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 GZF1Q9H116 711 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-202ENST00000431736 ZDHHC6Q9H6R6 413 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CALCOCO1Q9P1Z2 691 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 CDH22Q9UJ99 828 aa4.76□□□□□ -1.65
UBE4A-202ENST00000431736 KRBA1A5PL33 1030 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ZBTB42B2RXF5 422 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 SLC31A1O15431 190 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 HSF2BPO75031 334 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 GADD45BO75293 160 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 MSNP26038 577 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 PRKAA1Q13131 559 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ELOCQ15369 112 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CRY1Q16526 586 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TAF3Q5VWG9 929 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 IRGQQ8WZA9 623 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 SH3KBP1Q96B97 665 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 IFT43Q96FT9 208 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 HSFY1Q96LI6 401 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 OSBPL2Q9H1P3 480 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ST6GALNAC4Q9H4F1 302 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 PHPT1Q9NRX4 125 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CLIC5Q9NZA1 410 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 GPN3Q9UHW5 284 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 MAPK13O15264 365 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 FFAR2O15552 330 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 MTA2O94776 668 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LARGE1O95461 756 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 PAEPP09466 180 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 DLDP09622 509 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 PDGFRAP16234 1089 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TUBP50607 506 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 SLC7A9P82251 487 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 SLC20A2Q08357 652 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TMTC4Q5T4D3 741 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TMCO4Q5TGY1 634 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LILRA6Q6PI73 481 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LINC01465Q8N7H1 131 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 PDCD7Q8N8D1 485 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 OR6C4Q8NGE1 309 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 GRIN3AQ8TCU5 1115 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 C18orf8Q96DM3 657 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LSM14BQ9BX40 385 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 IRX2Q9BZI1 471 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 MRPL47Q9HD33 250 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ABCB8Q9NUT2 735 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LCMT1Q9UIC8 334 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 DMTF1Q9Y222 760 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 BCLAF3A2AJT9 711 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CREB3O43889 395 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ACSL4O60488 711 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 DTNBO60941 627 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CLDN11O75508 207 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 RFPL3O75679 317 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 RALBP11234 206 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TNNT1P13805 278 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 DPYDQ12882 1025 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 OVGP1Q12889 678 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 EDRF1Q3B7T1 1238 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 BZW1Q7L1Q6 419 aaKnown RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ANKRD52Q8NB46 1076 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 LMX1AQ8TE12 382 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 CTNNBL1Q8WYA6 563 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-202ENST00000431736 DCUN1D1Q96GG9 259 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 TMEM74Q96NL1 305 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 ADAM33Q9BZ11 813 aa4.75□□□□□ -1.65
UBE4A-202ENST00000431736 EPB41L5Q9HCM4 733 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms