RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CD101Q93033 1021 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 NTAN1Q96AB6 310 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 HES6Q96HZ4 224 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 NECTIN4Q96NY8 510 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 TLR10Q9BXR5 811 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CALN1Q9BXU9 219 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 S1PR5Q9H228 398 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 DHX35Q9H5Z1 703 aaKnown RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 TMPRSS4Q9NRS4 437 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 GKN1Q9NS71 199 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 TMEM51Q9NW97 253 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 DDX56Q9NY93 547 aaKnown RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 GDE1Q9NZC3 331 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC12A6Q9UHW9 1150 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ARHGAP26Q9UNA1 814 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 PCDHA3Q9Y5H8 950 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 MYO16Q9Y6X6 1858 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ATG2AQ2TAZ0 1938 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 MYO7AQ13402 2215 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 PI4K2BG5E9Z4 385 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 H3BRJ5 948 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 FANCGO15287 622 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 PAGE1O75459 146 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 STC2O76061 302 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 TUBB4AP04350 444 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SP100P23497 879 aaPredicted RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ADRA1BP35368 520 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC11A2P49281 568 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 AIF1P55008 147 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDH6P55285 790 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 RWDD2BP57060 319 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 MTA1Q13330 715 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SMAD4Q13485 552 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 CA9Q16790 459 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM78AQ5JUQ0 283 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ERMARDQ5T6L9 678 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SEL1L2Q5TEA6 688 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 CYP4V2Q6ZWL3 525 aaPredicted RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 PSTKQ8IV42 348 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 UNC45BQ8IWX7 931 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 KIF18AQ8NI77 898 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 UBE2Q2Q8WVN8 375 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SMARCD2Q92925 531 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 HLA-CQ95604 372 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC39A13Q96H72 371 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 RBM41Q96IZ5 413 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZFRQ96KR1 1074 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 BTN2A3PQ96KV6 586 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 EPAS1Q99814 870 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 DCLK3Q9C098 648 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SIK2Q9H0K1 926 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 POMKQ9H5K3 350 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ANLNQ9NQW6 1124 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 TDP1Q9NUW8 608 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 ARHGEF38Q9NXL2 777 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 XPO7Q9UIA9 1087 aaKnown RBP8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDH7Q9ULB5 785 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 FZD10Q9ULW2 581 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SNX12Q9UMY4 172 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 CCL26Q9Y258 94 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 SNX10Q9Y5X0 201 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
HMGA1P4-201ENST00000428643 KCNU1A8MYU2 1149 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 HAX1O00165 279 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 LEFTY2O00292 366 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 EEF2KO00418 725 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CREB3O43889 395 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CEP104O60308 925 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZRANB2O95218 330 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 KLKB1P03952 638 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 TCP1P17987 556 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CXCR5P32302 372 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 ARL4AP40617 200 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CETN2P41208 172 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 VIPR2P41587 438 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PEX5P50542 639 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 TPI1P60174 286 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 USP4Q13107 963 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 EIF4EBP2Q13542 120 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PDK2Q15119 407 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 LLGL1Q15334 1064 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 DPYSL2Q16555 572 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 ATP13A4Q4VNC1 1196 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CCDC181Q5TID7 509 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PIK3R6Q5UE93 754 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 DCAF12L1Q5VU92 463 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 RAP1GAP2Q684P5 730 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 RWDD4Q6NW29 188 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 LRRC31Q6UY01 552 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 OTOP3Q7RTS5 596 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms