RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SUSD2Q9UGT4 822 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 LHX6Q9UPM6 363 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 PTPRBP23467 1997 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 TMEM131Q92545 1883 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 H0Y626 953 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 KCNK3O14649 394 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 CBFA2T3O75081 653 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 TRIM16O95361 564 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 CYBBP04839 570 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 RDXP35241 583 aaKnown RBP17.31■□□□□ 0.36
VARS-216ENST00000428445 SGSHP51688 502 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 PDE4CQ08493 712 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 SLC14A1Q13336 389 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 GOLGA7BQ2TAP0 167 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 FMNL3Q8IVF7 1028 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 UCMAQ8WVF2 138 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 C6orf106Q9H6K1 298 aaPredicted RBP17.31■□□□□ 0.36
VARS-216ENST00000428445 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
VARS-216ENST00000428445 CELSR3Q9NYQ7 3312 aa17.31■□□□□ 0.36
VARS-216ENST00000428445 ADAMTS20P59510 1910 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 A0A1B0GVT2 93 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 GOLGA8CPA6NN73 597 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 PIK3R2O00459 728 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 BCAT2O15382 392 aaPredicted RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 ZBED1O96006 694 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ACADMP11310 421 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 RPL13P26373 211 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 HOXD9P28356 352 aaPredicted RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 HLA-FP30511 346 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ACSL1P33121 698 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CSNK1EP49674 416 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 HLA-BQ31612 363 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CBWD6Q4V339 395 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CBWD3Q5JTY5 395 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CBWD5Q5RIA9 395 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ARHGAP17Q68EM7 881 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 LAYNQ6UX15 382 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 SERPINA13PQ6UXR4 307 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ZC3H3Q8IXZ2 948 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 CPXM2Q8N436 756 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 GUF1Q8N442 669 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 ANKRD52Q8NB46 1076 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CADM4Q8NFZ8 388 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 ADAMTS14Q8WXS8 1223 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 SNX19Q92543 992 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 CDK5RAP1Q96SZ6 601 aaKnown RBP17.3■□□□□ 0.36
VARS-216ENST00000428445 NUP58Q9BVL2 599 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 UBXN6Q9BZV1 441 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 MTG2Q9H4K7 406 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 PCOLCE2Q9UKZ9 415 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 STRIP2Q9ULQ0 834 aa17.3■□□□□ 0.36
VARS-216ENST00000428445 BAHCC1Q9P281 2608 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 GOLGA6L7A0A1B0GV03 622 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 MSI1O43347 362 aaKnown RBP17.29■□□□□ 0.36
VARS-216ENST00000428445 CALCAP01258 141 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 MXI1P50539 228 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 ARID5AQ03989 594 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 TRIP4Q15650 581 aaPredicted RBP17.29■□□□□ 0.36
VARS-216ENST00000428445 PM20D1Q6GTS8 502 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 FAM217AQ8IXS0 508 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 ARHGAP18Q8N392 663 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 FBXL13Q8NEE6 735 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 C1orf216Q8TAB5 229 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 WFDC5Q8TCV5 224 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 TM7SF3Q9NS93 570 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 TSPAN16Q9UKR8 245 aa17.29■□□□□ 0.36
VARS-216ENST00000428445 ATRXP46100 2492 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 E7ENQ6 273 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 NPC1O15118 1278 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 GABBR2O75899 941 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 ATXN1LP0C7T5 689 aaKnown RBP17.28■□□□□ 0.36
VARS-216ENST00000428445 OXTRP30559 389 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 GTF2H1P32780 548 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 MATKP42679 507 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 MCCD1P59942 119 aaPredicted RBP17.28■□□□□ 0.36
VARS-216ENST00000428445 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 LRMPQ12912 555 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
VARS-216ENST00000428445 FNDC3BQ53EP0 1204 aaKnown RBP17.28■□□□□ 0.36
VARS-216ENST00000428445 BSPRYQ5W0U4 402 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 CCNI2Q6ZMN8 369 aaPredicted RBP17.28■□□□□ 0.36
VARS-216ENST00000428445 CHST9Q7L1S5 443 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 PROSER1Q86XN7 944 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 OR2T3Q8NH03 318 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 MDM1Q8TC05 714 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 PLD4Q96BZ4 506 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 ZDHHC5Q9C0B5 715 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 ABCB8Q9NUT2 735 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 BTBD3Q9Y2F9 522 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 CABIN1Q9Y6J0 2220 aa17.28■□□□□ 0.36
VARS-216ENST00000428445 ZNF202O95125 648 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 IGLV3-19P01714 112 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms