RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RUBCNQ92622 972 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 EZH1Q92800 747 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 PPP1R13BQ96KQ4 1090 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 BTN2A3PQ96KV6 586 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 PPP1R9BQ96SB3 815 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 FBRSL1Q9HCM7 1045 aaKnown RBP9.52□□□□□ -0.89
SMC1A-203ENST00000428014 RAPGEFL1Q9UHV5 662 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 RASAL2Q9UJF2 1139 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 SLC8A2Q9UPR5 921 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 PCDHGA5Q9Y5G8 931 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 FHOD1Q9Y613 1164 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.89
SMC1A-203ENST00000428014 VPS13AQ96RL7 3174 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SLC12A8A0AV02 714 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 TYW5A2RUC4 315 aaKnown RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 E5RJQ4 531 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 ALDH1A2O94788 518 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 NCAM1P13591 858 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 LCP1P13796 627 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SDHBP21912 280 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 STAT1P42224 750 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 DGKGP49619 791 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 TPM4P67936 248 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SATB1Q01826 763 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 CDR2Q01850 454 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SLC6A3Q01959 620 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 DMC1Q14565 340 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 IQCB1Q15051 598 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 C5orf22Q49AR2 442 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 FILIP1LQ4L180 1135 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 GRAMD4Q6IC98 578 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 DENND1BQ6P3S1 775 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 BNIPLQ7Z465 357 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SLC47A2Q86VL8 602 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 MIB1Q86YT6 1006 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 IL17RCQ8NAC3 791 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 OLIG1Q8TAK6 271 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 DQX1Q8TE96 717 aaKnown RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 GAB3Q8WWW8 586 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 C18orf8Q96DM3 657 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 PIWIL1Q96J94 861 aaKnown RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 VCPIP1Q96JH7 1222 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SPAG5Q96R06 1193 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 CPXM1Q96SM3 734 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 KCNK17Q96T54 332 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 POLMQ9NP87 494 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 SLC12A6Q9UHW9 1150 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 CYTH4Q9UIA0 394 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 NOCTQ9UK39 431 aaKnown RBP9.51□□□□□ -0.89
SMC1A-203ENST00000428014 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
SMC1A-203ENST00000428014 A0A1B0GTH6 734 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 TBC1D3BA6NDS4 549 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 KCNU1A8MYU2 1149 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CAPN9O14815 690 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ACSL4O60488 711 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 GFRA3O60609 400 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 DAB1O75553 588 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ENDOD1O94919 500 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 APOEP02649 317 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 RETP07949 1114 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 MMP8P22894 467 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 NTSR1P30989 418 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CCR1P32246 355 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 HOXD12P35452 270 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 MATKP42679 507 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 TBX4P57082 545 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 NOMO3P69849 1222 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CDK17Q00537 523 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CENPCQ03188 943 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 RAPGEF1Q13905 1077 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ANO4Q32M45 955 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 PTPN20Q4JDL3 420 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ANO6Q4KMQ2 910 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 PIK3R6Q5UE93 754 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 GJB7Q6PEY0 223 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 Q6ZS52 159 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ANKS1BQ7Z6G8 1248 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 DHX40Q8IX18 779 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 HJURPQ8NCD3 748 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 NEK11Q8NG66 645 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 RPLP0P6Q8NHW5 317 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 FIBINQ8TAL6 211 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 SYN2Q92777 582 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 FAM149B1Q96BN6 582 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 TMA16Q96EY4 203 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 FCRL2Q96LA5 508 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 C1orf74Q96LT6 269 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 NUP58Q9BVL2 599 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 LSM14BQ9BX40 385 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 CD248Q9HCU0 757 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 ST7Q9NRC1 585 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms