RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 FAM84AQ96KN4 292 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 SEPHS2Q99611 448 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 RAB23Q9ULC3 237 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 INPP4BO15327 924 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 FAM107AO95990 144 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 MGAT1P26572 445 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 MAPK10P53779 464 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
SPG11-202ENST00000427534 MOXD1Q6UVY6 613 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 PRUNE1Q86TP1 453 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 P3H2Q8IVL5 708 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 FAM50BQ9Y247 325 aa13.5□□□□□ -0.25
SPG11-202ENST00000427534 CHUKO15111 745 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 TBL1XO60907 577 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 PLK2Q9NYY3 685 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 AAR2Q9Y312 384 aaKnown RBP13.49□□□□□ -0.25
SPG11-202ENST00000427534 CD52P31358 61 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 THOP1P52888 689 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 CLYBLQ8N0X4 340 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 NOA1Q8NC60 698 aaKnown RBP13.49□□□□□ -0.25
SPG11-202ENST00000427534 SUSD6Q92537 303 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 TMX2Q9Y320 296 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 GAKO14976 1311 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 RAMP2O60895 175 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 SERPINB9P50453 376 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 BST2Q10589 180 aaKnown RBP13.49□□□□□ -0.25
SPG11-202ENST00000427534 DDR2Q16832 855 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 CEP78Q5JTW2 689 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 EPN3Q9H201 632 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 TSPAN8P19075 237 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 CLK1P49759 484 aaKnown RBP13.49□□□□□ -0.25
SPG11-202ENST00000427534 GRIK5Q16478 980 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 ING5Q8WYH8 240 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 APBA2Q99767 749 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 ELOVL6Q9H5J4 265 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 FFAR2O15552 330 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 MTA2O94776 668 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 CRTAMO95727 393 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 FAM228BP0C875 321 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 SERPINB3P29508 390 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 TFDP3Q5H9I0 405 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 TIGD7Q6NT04 549 aaPredicted RBP13.49□□□□□ -0.25
SPG11-202ENST00000427534 BBS7Q8IWZ6 715 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 PDCD2LQ9BRP1 358 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
SPG11-202ENST00000427534 AP3B1O00203 1094 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TP73O15350 636 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 BGNP21810 368 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ABL2P42684 1182 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ATP12AP54707 1039 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 SP3Q02447 781 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 NR6A1Q15406 480 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 AADACL2Q6P093 401 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 POMZP3Q6PJE2 187 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 EFL1Q7Z2Z2 1120 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 REXO1L1PQ8IX06 675 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ZNF786Q8N393 782 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TMEM245Q9H330 911 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ACP6Q9NPH0 428 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 XYLBO75191 536 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 RECQL4O94761 1208 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TYMPP19971 482 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 SHMT1P34896 483 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 MAB21L3Q8N8X9 362 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 GULP1Q9UBP9 304 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 MRPS23Q9Y3D9 190 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 PTPN11Q06124 597 aaPredicted RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 LAMB3Q13751 1172 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ERMARDQ5T6L9 678 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 RAET1GQ6H3X3 334 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 SPATA6LQ8N4H0 392 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 UTP15Q8TED0 518 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 RABGGTBP53611 331 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 CENPCQ03188 943 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TYW3Q6IPR3 259 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TDRD5Q8NAT2 981 aaKnown RBP13.48□□□□□ -0.25
SPG11-202ENST00000427534 TMEM159Q96B96 161 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 CCT7Q99832 543 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 DSEQ9UL01 958 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms