RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LAMA4Q16363 1823 aa6.29□□□□□ -1.4
C9orf3-205ENST00000427193 CCL15-CCL14A0A0B4J2E2 113 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 KLHL33A6NCF5 533 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 ZNF213O14771 459 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 HMGB1P09429 215 aaKnown RBP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 ZKSCAN1P17029 563 aaPredicted RBP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 RPS6KB1P23443 525 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 NPTX2P47972 431 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 ZNF81P51508 661 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 HAND2P61296 217 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 IL10RAQ13651 578 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 CCL15Q16663 113 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 RUFY3Q7L099 469 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 CYB5R4Q7L1T6 521 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 AMIGO2Q86SJ2 522 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 PDSS2Q86YH6 399 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 ANKRD13AQ8IZ07 590 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 RAET1EQ8TD07 263 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 DIS3LQ8TF46 1054 aaKnown RBP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 OPTNQ96CV9 577 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 LRIG1Q96JA1 1093 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 CLPTM1LQ96KA5 538 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 PBKQ96KB5 322 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 NEK1Q96PY6 1258 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 HAPLN3Q96S86 360 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 TMEM39BQ9GZU3 492 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 UPF2Q9HAU5 1272 aaKnown RBP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 HERC5Q9UII4 1024 aaKnown RBP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 SERPINB13Q9UIV8 391 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 LIMCH1Q9UPQ0 1083 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.28□□□□□ -1.4
C9orf3-205ENST00000427193 NID2Q14112 1375 aa6.28□□□□□ -1.4
C9orf3-205ENST00000427193 GREB1LQ9C091 1923 aaPredicted RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 URI1O94763 535 aaPredicted RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 CELA2AP08217 269 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 MCCP23508 829 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 EDNRBP24530 442 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 PSMA5P28066 241 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 LIFRP42702 1097 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 TDO2P48775 406 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 ST3GAL1Q11201 340 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 TNFAIP1Q13829 316 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 C3orf36Q3SXR2 165 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 SUPT20HL1Q3ZLR7 823 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 C17orf99Q6UX52 265 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 SLC44A5Q8NCS7 719 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 POC1BQ8TC44 478 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 SCAMP4Q969E2 229 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 DYNLL2Q96FJ2 89 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 ALG8Q9BVK2 526 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 UPF3BQ9BZI7 483 aaKnown RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 RNF41Q9H4P4 317 aaPredicted RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 SIDT1Q9NXL6 827 aaKnown RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 SWAP70Q9UH65 585 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 ADAM21Q9UKJ8 722 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 PCDHB1Q9Y5F3 818 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 ECM29Q5VYK3 1845 aa6.27□□□□□ -1.41
C9orf3-205ENST00000427193 BAZ2AQ9UIF9 1905 aaKnown RBP6.27□□□□□ -1.41
C9orf3-205ENST00000427193 ADGRA2Q96PE1 1338 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 A0A0B4J269 797 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 CCDC154A6NI56 674 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TCP10L2B9ZVM9 353 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 E9PLN8 166 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 SH2B2O14492 632 aaPredicted RBP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TTLL1O95922 423 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TFRCP02786 760 aaKnown RBP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 CPA1P15085 419 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 ITGB6P18564 788 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 PSMC4P43686 418 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 RBM5P52756 815 aaKnown RBP eCLIP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 RCAN1P53805 252 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 KRT85P78386 507 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TCP10Q12799 353 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TROAPQ12815 778 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 PICALMQ13492 652 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 TUBB3Q13509 450 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 CUL4AQ13619 759 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 MFSD6Q6ZSS7 791 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 DDX42Q86XP3 938 aaKnown RBP eCLIP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 NCOA7Q8NI08 942 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 COA7Q96BR5 231 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 ZNF778Q96MU6 729 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 JAKMIP1Q96N16 626 aaKnown RBP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 DEFB118Q96PH6 123 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 DMRTA2Q96SC8 542 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 OSBPL9Q96SU4 736 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 VKORC1Q9BQB6 163 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 KRT23Q9C075 422 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 LY9Q9HBG7 655 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 RLIMQ9NVW2 624 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 FLRT1Q9NZU1 646 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 ST3GAL5Q9UNP4 418 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 CYP46A1Q9Y6A2 500 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 CFAP20Q9Y6A4 193 aaKnown RBP6.26□□□□□ -1.41
C9orf3-205ENST00000427193 NAV1Q8NEY1 1877 aa6.26□□□□□ -1.41
C9orf3-205ENST00000427193 VWC2LB2RUY7 222 aa6.25□□□□□ -1.41
C9orf3-205ENST00000427193 BTBD19C9JJ37 291 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms