RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MCUQ8NE86 351 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 CDKL2Q92772 493 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 LRRC39Q96DD0 335 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF778Q96MU6 729 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 LGMNQ99538 433 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 GPR20Q99678 358 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 FDXACB1Q9BRP7 624 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 CYP3A43Q9HB55 503 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 GBA2Q9HCG7 927 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 S100A14Q9HCY8 104 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 XPNPEP3Q9NQH7 507 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TNFSF13BQ9Y275 285 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 SNX9Q9Y5X1 595 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PSAT1Q9Y617 370 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 KIAA1217Q5T5P2 1943 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 RNASEH1O60930 286 aaKnown RBP7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 SIN3BO75182 1162 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 KLHL2O95198 593 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 LCP1P13796 627 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 MGAT1P26572 445 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 MLH1P40692 756 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 HDAC4P56524 1084 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 MBTD1Q05BQ5 628 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ITGA9Q13797 1035 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PDE1CQ14123 709 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC9A4Q6AI14 798 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 LCLAT1Q6UWP7 414 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ILDR2Q71H61 639 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 MFN1Q8IWA4 741 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 DEFB107AQ8IZN7 70 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 CCNYQ8ND76 341 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 CLEC4CQ8WTT0 213 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP1R36Q96LQ0 422 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 RNPEPQ9H4A4 650 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ACSS2Q9NR19 701 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 DPP3Q9NY33 737 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 HESX1Q9UBX0 185 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 AKT3Q9Y243 479 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PAPSS1O43252 624 aaPredicted RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 FKBP6O75344 327 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 STK10O94804 968 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ALDOAP04075 364 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PFKMP08237 780 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ERVK-10P10266 1014 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 FGF3P11487 239 aaPredicted RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ETS2P15036 469 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GSTT1P30711 240 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 CPOXP36551 454 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ABCG1P45844 678 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PHKA2P46019 1235 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GTF2A2P52657 109 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF280AP59817 542 aaPredicted RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC6A3Q01959 620 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 USP4Q13107 963 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TRIP10Q15642 601 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TBCCQ15814 346 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 RABGAP1LQ5R372 815 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 MBLAC2Q68D91 279 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 KYAT3Q6YP21 454 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ARCQ7LC44 396 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 HPS6Q86YV9 775 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TNS4Q8IZW8 715 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PYROXD2Q8N2H3 581 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 CNKSR2Q8WXI2 1034 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP2R3CQ969Q6 453 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 RTP4Q96DX8 246 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 KIF12Q96FN5 646 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 IFT43Q96FT9 208 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 C12orf42Q96LP6 360 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 NR1H4Q96RI1 486 aaPredicted RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TMEM216Q9P0N5 145 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PCNTO95613 3336 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 DCXO43602 365 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PLIN3O60664 434 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 VTNP04004 478 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PDGFRBP09619 1106 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 IDH3AP50213 366 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 RBP5P82980 135 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GSTA3Q16772 222 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 C11orf91Q3C1V1 193 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GRAMD1BQ3KR37 738 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 SFT2D3Q587I9 215 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PACS1Q6VY07 963 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 CMC1Q7Z7K0 106 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TTC30AQ86WT1 665 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 OR6B3Q8NGW1 331 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PGBD4Q96DM1 585 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TRAPPC9Q96Q05 1148 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 MRPL45Q9BRJ2 306 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 EMCNQ9ULC0 261 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 E9PBE3 544 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 HCRTO43612 131 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 KLHL41O60662 606 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GCATO75600 419 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GSRP00390 522 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 SERPINE1P05121 402 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 TGFB3P10600 412 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 RALBP11234 206 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms