RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 KLF18A0A0U1RQI7 1052 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 NPC1O15118 1278 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 SGSM2O43147 1006 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 USP12O75317 370 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 CASRP41180 1078 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 PPP3CCP48454 512 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 C21orf59P57076 290 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 SAFBQ15424 915 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 PCSK7Q16549 785 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 DDR2Q16832 855 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 FUT11Q495W5 492 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 KCNT1Q5JUK3 1230 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 GALNT17Q6IS24 598 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 MPZL3Q6UWV2 235 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 BLIDQ8IZY5 108 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 ZNF564Q8TBZ8 553 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 LEO1Q8WVC0 666 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 SCFD1Q8WVM8 642 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 SNX19Q92543 992 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 PRCCQ92733 491 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 GRAMD1AQ96CP6 724 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 DUSP9Q99956 384 aaKnown RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 RNF26Q9BY78 433 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 ACE2Q9BYF1 805 aaPredicted RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 MKRN2Q9H000 416 aaKnown RBP8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 SLCO1B1Q9Y6L6 691 aa8.4□□□□□ -1.06
CLCN3P1-201ENST00000423965 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.07
CLCN3P1-201ENST00000423965 ANAPC1Q9H1A4 1944 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ABLIM1O14639 778 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ACADMP11310 421 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 CHMLP26374 656 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 GRIK1P39086 918 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ARRB1P49407 418 aaPredicted RBP8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 GPR15P49685 360 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 CDR1P51861 262 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 RACK1P63244 317 aaKnown RBP8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 SHBQ15464 509 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 PLA2G4EQ3MJ16 856 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ZSCAN23Q3MJ62 389 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 SDHAF4Q5VUM1 108 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 GRAMD4Q6IC98 578 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 FAM35AQ86V20 835 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 CEP295NLQ96MC4 621 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 KIFC3Q9BVG8 833 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ADNPQ9H2P0 1102 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 TRPM5Q9NZQ8 1165 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 ANAPC2Q9UJX6 822 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 PCDHA12Q9UN75 941 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 CPQQ9Y646 472 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 KCNMB2Q9Y691 235 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
CLCN3P1-201ENST00000423965 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TTC26A0AVF1 554 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 WASH3PC4AMC7 463 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 CYB561D2O14569 222 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 SLC27A2O14975 620 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 SYNCRIPO60506 623 aaKnown RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TSPAN3O60637 253 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 OLFM2O95897 454 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 RXRGP48443 463 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 DUSP3P51452 185 aaPredicted RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TSPY1Q01534 308 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 E2F5Q15329 346 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 SFMBT2Q5VUG0 894 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 SPATA1Q5VX52 437 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 NEK8Q86SG6 692 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 STKLD1Q8NE28 680 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 KIFAP3Q92845 792 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 BIRC7Q96CA5 298 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 ERLEC1Q96DZ1 483 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 XPO6Q96QU8 1125 aaKnown RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TARS2Q9BW92 718 aaKnown RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 C6orf106Q9H6K1 298 aaPredicted RBP8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 SPHK2Q9NRA0 654 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TMLHEQ9NVH6 421 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 CFAP97Q9P2B7 532 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 TJP2Q9UDY2 1190 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 PCDHGA8Q9Y5G5 932 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 STON1Q9Y6Q2 735 aa8.38□□□□□ -1.07
CLCN3P1-201ENST00000423965 A0A087WWV3 80 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 VPS37CA5D8V6 355 aaPredicted RBP8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 CDRT15L2A8MXV6 281 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 PRRT4C9JH25 899 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 PIRO00625 290 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 OPA1O60313 960 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 CCNT1O60563 726 aaKnown RBP8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 CSO75390 466 aaKnown RBP8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 TOM1L1O75674 476 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 RGS9O75916 674 aaPredicted RBP8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 CLTAP09496 248 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 CYP2F1P24903 491 aa8.37□□□□□ -1.07
CLCN3P1-201ENST00000423965 EPHA8P29322 1005 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms