RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MKRN2Q9H000 416 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 MIR1-1HGQ9H1L0 117 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 ELOVL2Q9NXB9 296 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 HBS1LQ9Y450 684 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 NEUROG3Q9Y4Z2 214 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 PLXNA2O75051 1894 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 H0Y626 953 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TULP2O00295 520 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TRIM16O95361 564 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 SETSIPP0DME0 302 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 PRKCHP24723 683 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 MAOBP27338 520 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 OXTRP30559 389 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 PRCPP42785 496 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 ZNF445P59923 1031 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 MCCD1P59942 119 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 NUCB2P80303 420 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 FKBP3Q00688 224 aaKnown RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 GRIK2Q13002 908 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 ENPP2Q13822 863 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 ZNF658Q5TYW1 1059 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 PM20D1Q6GTS8 502 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TMPRSS6Q8IU80 811 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 ZCCHC9Q8N567 271 aaKnown RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 GATA6Q92908 595 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 TMEM121BQ9BXQ6 578 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 ZDHHC5Q9C0B5 715 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 WSB2Q9NYS7 404 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-205ENST00000423214 PCDHB9Q9Y5E1 797 aa16.87■□□□□ 0.29
COL18A1-205ENST00000423214 A0A1B0GTW7 788 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 TSPAN3O60637 253 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 SMC2O95347 1197 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 VDRP11473 427 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 CD59P13987 128 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-205ENST00000423214 TPMTP51580 245 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 LRRC63Q05C16 580 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 LRMPQ12912 555 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 SLC14A1Q13336 389 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 ZNF423Q2M1K9 1284 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 DCAF12L1Q5VU92 463 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 BHLHA9Q7RTU4 235 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 NAXDQ8IW45 347 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 KDF1Q8NAX2 398 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-205ENST00000423214 CADM4Q8NFZ8 388 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 WFIKKN2Q8TEU8 576 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 SORCS1Q8WY21 1168 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 NDRG1Q92597 394 aaKnown RBP16.86■□□□□ 0.29
COL18A1-205ENST00000423214 EDEM1Q92611 657 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 ITM2CQ9NQX7 267 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 ABCC13Q9NSE7 274 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 ARMCX3Q9UH62 379 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-205ENST00000423214 SFMBT1Q9UHJ3 866 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 KLK13Q9UKR3 277 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 CLEC4EQ9ULY5 219 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 COQ4Q9Y3A0 265 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 NFE2L3Q9Y4A8 694 aa16.86■□□□□ 0.29
COL18A1-205ENST00000423214 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 TIMM44O43615 452 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 LATS1O95835 1130 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 COPAP53621 1224 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 STIM1Q13586 685 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 BSPRYQ5W0U4 402 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 UBA3Q8TBC4 463 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 SNX19Q92543 992 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 SMARCE1Q969G3 411 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
COL18A1-205ENST00000423214 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
COL18A1-205ENST00000423214 MSRB2Q9Y3D2 182 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 PKD1L2Q7Z442 2459 aa16.85■□□□□ 0.29
COL18A1-205ENST00000423214 CABIN1Q9Y6J0 2220 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 KNL1Q8NG31 2342 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 E7ENQ6 273 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 O00370 1275 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 PSMA7O14818 248 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 MSI1O43347 362 aaKnown RBP16.84■□□□□ 0.29
COL18A1-205ENST00000423214 SH3BP5O60239 455 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 CER1O95813 267 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 HLA-EP13747 358 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 LCP1P13796 627 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 FAM193AP78312 1265 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 TMEM215Q68D42 235 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 ANKRD40Q6AI12 368 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 CHST9Q7L1S5 443 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 FAM124AQ86V42 546 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
COL18A1-205ENST00000423214 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
COL18A1-205ENST00000423214 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 DNASE2BQ8WZ79 361 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms