RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GREM1O60565 184 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 APOEP02649 317 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 KLKB1P03952 638 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 COMTP21964 271 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 IL1R2P27930 398 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 GJC1P36383 396 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 GGCXP38435 758 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 HARS2P49590 506 aaKnown RBP16.31■□□□□ 0.2
DDX55-203ENST00000421670 SLC25A11Q02978 314 aaKnown RBP16.31■□□□□ 0.2
DDX55-203ENST00000421670 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 NUGGCQ68CJ6 796 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 CYP4V2Q6ZWL3 525 aaPredicted RBP16.31■□□□□ 0.2
DDX55-203ENST00000421670 DENND1CQ8IV53 801 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
DDX55-203ENST00000421670 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX55-203ENST00000421670 LCMT1Q9UIC8 334 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 USP18Q9UMW8 372 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 SH3BP1Q9Y3L3 701 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 ALG6Q9Y672 507 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 KCNU1A8MYU2 1149 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 PRPSAP2O60256 369 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 TNNT1P13805 278 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 PCK1P35558 622 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 TAS2R40P59535 323 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 SMTNL2Q2TAL5 461 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 BRMS1LQ5PSV4 323 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 VITQ6UXI7 678 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 DDX42Q86XP3 938 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX55-203ENST00000421670 CALR3Q96L12 384 aaKnown RBP16.3■□□□□ 0.2
DDX55-203ENST00000421670 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 ZWILCHQ9H900 591 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 ARHGEF38Q9NXL2 777 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 LSM7Q9UK45 103 aaKnown RBP16.3■□□□□ 0.2
DDX55-203ENST00000421670 NUMBLQ9Y6R0 609 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 A0A0C4DFX4 3053 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 MIA3Q5JRA6 1907 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 FTCDO95954 541 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 SLC2A3P11169 496 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 TCF3P15923 654 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 HTR4Q13639 388 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 KCNT1Q5JUK3 1230 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 Q6ZNB5 142 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 UNC45BQ8IWX7 931 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 BBS7Q8IWZ6 715 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 RSAD2Q8WXG1 361 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 RPP25Q9BUL9 199 aaKnown RBP16.3■□□□□ 0.2
DDX55-203ENST00000421670 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
DDX55-203ENST00000421670 MAGEB5Q9BZ81 275 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 GPATCH2LQ9NWQ4 482 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 AGO1Q9UL18 857 aaKnown RBP16.3■□□□□ 0.2
DDX55-203ENST00000421670 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
DDX55-203ENST00000421670 E2F8A0AVK6 867 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 GOLGA6L9A6NEM1 432 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 PAGE1O75459 146 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
DDX55-203ENST00000421670 GRM2Q14416 872 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 AAK1Q2M2I8 961 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 PIK3R6Q5UE93 754 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 NADSYN1Q6IA69 706 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 HTR3DQ70Z44 454 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 SLFN11Q7Z7L1 901 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 ATP6V0D2Q8N8Y2 350 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 BPIFB1Q8TDL5 484 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 NTAN1Q96AB6 310 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 ELSPBP1Q96BH3 223 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 BTN2A3PQ96KV6 586 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 KLHL11Q9NVR0 708 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 PACSIN2Q9UNF0 486 aaPredicted RBP16.29■□□□□ 0.2
DDX55-203ENST00000421670 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 COL4A2P08572 1712 aa16.29■□□□□ 0.2
DDX55-203ENST00000421670 GOLGA6L7A0A1B0GV03 622 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 ANHXE9PGG2 379 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 ADRA1BP35368 520 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 SLC1A1P43005 524 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 MARCKSL1P49006 195 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 ARL13BQ3SXY8 428 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 ATP13A4Q4VNC1 1196 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 FAM133BQ5BKY9 247 aaKnown RBP16.28■□□□□ 0.2
DDX55-203ENST00000421670 SYCE1Q8N0S2 351 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 HSPH1Q92598 858 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 DCLK3Q9C098 648 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 SIK2Q9H0K1 926 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 OBP2AQ9NY56 170 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 FZD10Q9ULW2 581 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 AP4E1Q9UPM8 1137 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 HS3ST4Q9Y661 456 aa16.28■□□□□ 0.2
DDX55-203ENST00000421670 TRDMT1O14717 391 aaKnown RBP16.27■□□□□ 0.2
DDX55-203ENST00000421670 ACSL4O60488 711 aa16.27■□□□□ 0.2
DDX55-203ENST00000421670 ECI2O75521 394 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms