RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 C10orf120Q5SQS8 335 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ZDHHC13Q8IUH4 622 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 SIX5Q8N196 739 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 CAPN10Q9HC96 672 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 GTF2A1LQ9UNN4 478 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 GLI2P10070 1586 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 A0A096LPK6 155 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 SRRM3A6NNA2 597 aaPredicted RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 JCHAINP01591 159 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ETS1P14921 441 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 RPL5P46777 297 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 SNX17Q15036 470 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 EPHX4Q8IUS5 362 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 LPAR1Q92633 364 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 WDR41Q9HAD4 459 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 TRIM39Q9HCM9 518 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ENTPD7Q9NQZ7 604 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 BTBD3Q9Y2F9 522 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 MGAT4DA6NG13 374 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 LSM8O95777 96 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 FAM131BQ86XD5 332 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 DUSP9Q99956 384 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 DPY30Q9C005 99 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 MGAT1P26572 445 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 NPTX2P47972 431 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 AUHQ13825 339 aaKnown RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 MGAT5BQ3V5L5 792 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TIGD7Q6NT04 549 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 VN1R5Q7Z5H4 357 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 C10orf53Q8N6V4 93 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TPD52L3Q96J77 140 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 SLC38A7Q9NVC3 462 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 FAM205AQ6ZU69 1335 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 GLP2RO95838 553 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 JAK1P23458 1154 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 GPC1P35052 558 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 NR1H2P55055 460 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CYP24A1Q07973 514 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 UTS2BQ765I0 119 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 FNDC5Q8NAU1 212 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ITFG1Q8TB96 612 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TBC1D16Q8TBP0 767 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 MAGEE2Q8TD90 523 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CPNE1Q99829 537 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 EFCAB10A6NFE3 127 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CTSHP09668 335 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 FAM86B2P0C5J1 330 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TPH1P17752 444 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 PGAM1P18669 254 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 HARS2P49590 506 aaKnown RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TAF6P49848 677 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TSNQ15631 228 aaKnown RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 GSTA3Q16772 222 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 C8orf59Q8N0T1 100 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 WDR48Q8TAF3 677 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 EHD3Q9NZN3 535 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ADCY10Q96PN6 1610 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 SMIM31A0A1B0GVY4 71 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 GNG14A0A1W2PPG7 69 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CCNG1P51959 295 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 PRKAA2P54646 552 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CSNK2BP67870 215 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 KLHL12Q53G59 568 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 C16orf46Q6P387 395 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 NEK10Q6ZWH5 1172 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CCDC80Q76M96 950 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 KCNMB4Q86W47 210 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 FBXW8Q8N3Y1 598 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 ETNPPLQ8TBG4 499 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CHID1Q9BWS9 393 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CISHQ9NSE2 258 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 IL6P05231 212 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TTKP33981 857 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 NUMBP49757 651 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 POU6F1Q14863 301 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 SHROOM1Q2M3G4 852 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CES3Q6UWW8 571 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 CAMK1DQ8IU85 385 aa12.64□□□□□ -0.39
CLCN4-203ENST00000421085 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms