RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 TISP43B9A030 160 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 I3L4J1 428 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 CYB561D2O14569 222 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SNNO75324 88 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 STAMBPO95630 424 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 OCM2P0CE71 109 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 OCMP0CE72 109 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 IL1R1P14778 569 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 NDST2P52849 883 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 COPAP53621 1224 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SLC5A3P53794 718 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 RPS3AP61247 264 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 IRX4P78413 519 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TMPRSS15P98073 1019 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 HIF1AQ16665 826 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 C2CD6Q53TS8 623 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 LRRC38Q5VT99 294 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ITPRIPL1Q6GPH6 555 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 OGFOD2Q6N063 350 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 DPP8Q6V1X1 898 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 MON1BQ7L1V2 547 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 FASTKD5Q7L8L6 764 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 CHERPQ8IWX8 916 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 DAW1Q8N136 415 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 CCDC33Q8N5R6 958 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 FBXO36Q8NEA4 188 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ZSWIM2Q8NEG5 633 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TSPAN14Q8NG11 270 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SEMA4DQ92854 862 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TEKT1Q969V4 418 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ELMO3Q96BJ8 720 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 RILPQ96NA2 401 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TRPC7Q9HCX4 862 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 PACSIN3Q9UKS6 424 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ITGA11Q9UKX5 1188 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ZNF335Q9H4Z2 1342 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 IQANK1A0A1B0GTG1 560 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TCRBV7S3A2A0A539 114 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 XPO1O14980 1071 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 ZC3H11AO75152 810 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD2-202ENST00000420239 ZMPSTE24O75844 475 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TMEM63AO94886 807 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 CAPNS1P04632 268 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 INHBBP09529 407 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TCF4P15884 667 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 NELFEP18615 380 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 SHMT1P34896 483 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SLC16A2P36021 539 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 PPARGP37231 505 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 TMED10P49755 219 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 PRELPP51888 382 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 MRPS5P82675 430 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 GCNT1Q02742 428 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 NFX1Q12986 1120 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 ATP13A4Q4VNC1 1196 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ODR4Q5SWX8 454 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 KAZNQ674X7 775 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 PLEKHA7Q6IQ23 1121 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 NANOGP8Q6NSW7 305 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 NEPROQ6NW34 567 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 PPP1R2P3Q6NXS1 205 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 MAVSQ7Z434 540 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 RHPN2Q8IUC4 686 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 IGDCC3Q8IVU1 814 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 DEFB107AQ8IZN7 70 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SLC7A5P1Q8MH63 180 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 FBXW8Q8N3Y1 598 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 NAT8LQ8N9F0 302 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 SLC35B2Q8TB61 432 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 SLC44A1Q8WWI5 657 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 STARD8Q92502 1023 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 APBB2Q92870 758 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 GPATCH1Q9BRR8 931 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 FRMD8P1Q9BZ68 369 aaPredicted RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 TMEM8AQ9HCN3 771 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 PNPLA8Q9NP80 782 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TBC1D23Q9NUY8 699 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 HERC5Q9UII4 1024 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 CCPG1Q9ULG6 757 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 TSC22D4Q9Y3Q8 395 aa6.29□□□□□ -1.4
CHD2-202ENST00000420239 MYH9P35579 1960 aaKnown RBP6.29□□□□□ -1.4
CHD2-202ENST00000420239 DGKIO75912 1065 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 LDHAP00338 332 aaKnown RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 ADRB2P07550 413 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 NAT1P18440 290 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 GABRB3P28472 473 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 PRDX6P30041 224 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 NUP107P57740 925 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms