RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GOLGA6AQ9NYA3 693 aa21.71■■□□□ 1.07
GPC1-202ENST00000420138 DTLQ9NZJ0 730 aa21.71■■□□□ 1.07
GPC1-202ENST00000420138 PLAAQ9Y263 795 aa21.71■■□□□ 1.07
GPC1-202ENST00000420138 H3BRJ5 948 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 STIP1P31948 543 aaKnown RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 NR2C2P49116 596 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 PMS2P54278 862 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 MTMR3Q13615 1198 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 BTG3Q14201 252 aaPredicted RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 MGAT5BQ3V5L5 792 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 SPOUT1Q5T280 376 aaKnown RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 RNASEH2BQ5TBB1 312 aaKnown RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 DARS2Q6PI48 645 aaKnown RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 DENND5BQ6ZUT9 1274 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 RFX8Q6ZV50 586 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 UBLCP1Q8WVY7 318 aaPredicted RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 RTP4Q96DX8 246 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 SEPT5Q99719 369 aaPredicted RBP21.7■■□□□ 1.06
GPC1-202ENST00000420138 SEMA4AQ9H3S1 761 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 GMIPQ9P107 970 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 SFMBT1Q9UHJ3 866 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 NUDT5Q9UKK9 219 aa21.7■■□□□ 1.06
GPC1-202ENST00000420138 BCLAF3A2AJT9 711 aaKnown RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 H7C0C1 242 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 CREB3O43889 395 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 RARGP13631 454 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 OR1D2P34982 312 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ATP5OP48047 213 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 PSRC1Q6PGN9 363 aaPredicted RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 COLGALT1Q8NBJ5 622 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 FAM76AQ8TAV0 307 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 LRRN4Q8WUT4 740 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 OLFM3Q96PB7 478 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 YME1L1Q96TA2 773 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 PABPC3Q9H361 631 aaKnown RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 PRDM16Q9HAZ2 1276 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ARHGEF38Q9NXL2 777 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 TPX2Q9ULW0 747 aaKnown RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 FARP1Q9Y4F1 1045 aaPredicted RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 SNX10Q9Y5X0 201 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 DCLK1O15075 740 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ATF6P18850 670 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 RBL1P28749 1068 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 HCAR3P49019 387 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 DSG1Q02413 1049 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ARL13BQ3SXY8 428 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 FAM182AQ5T1J6 154 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ARTNQ5T4W7 220 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 LRIG3Q6UXM1 1119 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 OR2W6PQ8NHA6 318 aa21.69■■□□□ 1.06
GPC1-202ENST00000420138 ZMYND8Q9ULU4 1186 aaPredicted RBP21.69■■□□□ 1.06
GPC1-202ENST00000420138 EEF2KO00418 725 aaKnown RBP21.68■■□□□ 1.06
GPC1-202ENST00000420138 C2CD2LO14523 706 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 MSI1O43347 362 aaKnown RBP21.68■■□□□ 1.06
GPC1-202ENST00000420138 YWHAQP27348 245 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 XRCC4Q13426 336 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 SLMAPQ14BN4 828 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 TMEM240Q5SV17 173 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 MSANTD2Q6P1R3 559 aa21.68■■□□□ 1.06
GPC1-202ENST00000420138 PLXNA3P51805 1871 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 MFSD11O43934 449 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 LINC00271P0C7V0 271 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 LAG3P18627 525 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 PAFAH1B3Q15102 231 aaKnown RBP21.67■■□□□ 1.06
GPC1-202ENST00000420138 CCDC33Q8N5R6 958 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 ARL8AQ96BM9 186 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 HERC2P3Q9BVR0 1158 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 NEU3Q9UQ49 428 aa21.67■■□□□ 1.06
GPC1-202ENST00000420138 RTN3O95197 1032 aaPredicted RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 ERCC2P18074 760 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 TAF10Q12962 218 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 MORF4L2Q15014 288 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 SLC45A4Q5BKX6 768 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 TTMPQ5BVD1 217 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 BRMS1LQ5PSV4 323 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 KIAA1841Q6NSI8 718 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 CCDC25Q86WR0 208 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 ARHGAP18Q8N392 663 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 ZCCHC9Q8N567 271 aaKnown RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 CPT1BQ92523 772 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 DPF3Q92784 378 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 TMEM169Q96HH4 297 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 ABHD8Q96I13 439 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 QKIQ96PU8 341 aaKnown RBP eCLIP21.66■■□□□ 1.06
GPC1-202ENST00000420138 LBHD1Q9BQE6 289 aaPredicted RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 OSBPL2Q9H1P3 480 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 LRRC4CQ9HCJ2 640 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 SPG21Q9NZD8 308 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 CXXC1Q9P0U4 656 aaPredicted RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 OR12D3Q9UGF7 316 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 CFAP69A5D8W1 941 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 KCNN4O15554 427 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 ABLIM3O94929 683 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 SEC24AO95486 1093 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 NUDT17P0C025 328 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 RPL10AP62906 217 aaKnown RBP21.66■■□□□ 1.06
GPC1-202ENST00000420138 ZNF844Q08AG5 666 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 ANKRD22Q5VYY1 191 aa21.66■■□□□ 1.06
GPC1-202ENST00000420138 NAT8LQ8N9F0 302 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms