RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ZDHHC6Q9H6R6 413 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 A0A0A6YYK5 440 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 PSEN2P49810 448 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TRIM32Q13049 653 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 Q4G0T1 1027 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CCDC103Q8IW40 242 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ATG16L2Q8NAA4 619 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 STMN3Q9NZ72 180 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 RBP1P09455 135 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 AMD1P17707 334 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CCT8P50990 548 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 UNKQ9C0B0 810 aaKnown RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 VTA1Q9NP79 307 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ACSL4O60488 711 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 UMPSP11172 480 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ERVK-24P63145 666 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 KLC1Q07866 573 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TAF13Q15543 124 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 USP45Q70EL2 814 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 EMC1Q8N766 993 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 PPP1R16AQ96I34 528 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TRAV19A0A0A6YYK7 116 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 PLEKP08567 350 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CSNK2BP67870 215 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 MPP3Q13368 585 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 SAMD3Q8N6K7 520 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 EFCAB1Q9HAE3 211 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 GTF3C4Q9UKN8 822 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 JAK1P23458 1154 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CTNNB1P35222 781 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 OVGP1Q12889 678 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 PKN1Q16512 942 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 POM121L1PQ3SYA9 428 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 NEK10Q6ZWH5 1172 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 REPS2Q8NFH8 660 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF839A8K0R7 811 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 TEX28O15482 410 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 BDNFP23560 247 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 BEX3Q00994 111 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 INSCQ1MX18 579 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 TYW3Q6IPR3 259 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 NECAB2Q7Z6G3 386 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 GFM2Q969S9 779 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 MTFMTQ96DP5 389 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 GON4LQ3T8J9 2241 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 FAM220BPB1ANY3 271 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CXCL11O14625 94 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 PARNO95453 639 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 LSM8O95777 96 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 PABPC1P11940 636 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 PEX5P50542 639 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 C1DQ13901 141 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 SCUBE3Q8IX30 993 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 GLMNQ92990 594 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CEP41Q9BYV8 373 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 SIK3Q9Y2K2 1263 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 BAIAP3O94812 1187 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 LSP1P33241 339 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 GIT2Q14161 759 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 NFIL3Q16649 462 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 KIAA1324Q6UXG2 1013 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ELOVL4Q9GZR5 314 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ALDH5A1P51649 535 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 KCNB2Q92953 911 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ZMYM5Q9UJ78 669 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 IL1R1P14778 569 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 ZNF24P17028 368 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CNTFP26441 200 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 SERPINB1P30740 379 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 CRYMQ14894 314 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 DAGLBQ8NCG7 672 aa11.48□□□□□ -0.57
PTCH1-205ENST00000418258 WDR36Q8NI36 951 aaKnown RBP11.48□□□□□ -0.57
PTCH1-205ENST00000418258 GRIN3AQ8TCU5 1115 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms