RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TRIAP1O43715 76 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 C1QL1O75973 258 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ZRANB2O95218 330 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ARIH2O95376 493 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 FTLP02792 175 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 RHOP08100 348 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 NR2F6P10588 404 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 XBP1P17861 261 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 KCNA3P22001 575 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 KIF5BP33176 963 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 NDUFV1P49821 464 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 TCP10Q12799 353 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 PPP2R5BQ15173 497 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 DLGAP5Q15398 846 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 SAFBQ15424 915 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 COLEC12Q5KU26 742 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 KIAA0895LQ68EN5 471 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 CDC42EP5Q6NZY7 148 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 TAF2Q6P1X5 1199 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 CLEC17AQ6ZS10 378 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 HEATR3Q7Z4Q2 680 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 FAM177A1Q8N128 213 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 SLC44A5Q8NCS7 719 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 PSD4Q8NDX1 1056 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 SYAP1Q96A49 352 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ZNF396Q96N95 335 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 CNPPD1Q9BV87 410 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ASPSCR1Q9BZE9 553 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 OSBPL5Q9H0X9 879 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ZSCAN16Q9H4T2 348 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 HOMER2Q9NSB8 354 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 SIDT1Q9NXL6 827 aaKnown RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 FEZ2Q9UHY8 353 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 STX8Q9UNK0 236 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 CNPY2Q9Y2B0 182 aa4.29□□□□□ -1.72
HMGB3P20-201ENST00000417997 GOLGA6L4A6NEF3 574 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 E7ENX8 843 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 SMIM22K7EJ46 135 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 PSMD14O00487 310 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 NMT2O60551 498 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 ENTPD3O75355 529 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 WDHD1O75717 1129 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 KIF20AO95235 890 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 DEXIO95424 95 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CTDNEP1O95476 244 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CHEK2O96017 543 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 RARBP10826 455 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CDK4P11802 303 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 ITGALP20701 1170 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 GNAQP50148 359 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 PLCD1P51178 756 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CACNB3P54284 484 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 NXPH1P58417 271 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 TAP2Q03519 686 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 NOGQ13253 232 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 HABP2Q14520 560 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 TNIP1Q15025 636 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 PTPRRQ15256 657 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 KLHL40Q2TBA0 621 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 ZBTB46Q86UZ6 589 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 DGKHQ86XP1 1220 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CPA6Q8N4T0 437 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CAMKK1Q8N5S9 505 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 FANCBQ8NB91 859 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 AGBL3Q8NEM8 1001 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 BICD2Q8TD16 824 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 PHKBQ93100 1093 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 RNF26Q9BY78 433 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 ACTRT3Q9BYD9 372 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 SIK2Q9H0K1 926 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 DHX36Q9H2U1 1008 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 TDRD3Q9H7E2 651 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 VEZTQ9HBM0 779 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 DDX4Q9NQI0 724 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 KLC4Q9NSK0 619 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 MRPS18AQ9NVS2 196 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CFAP45Q9UL16 551 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 FRMD4BQ9Y2L6 1034 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 LUC7L2Q9Y383 392 aaKnown RBP4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 SPEF1Q9Y4P9 236 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 ENTPD2Q9Y5L3 495 aa4.28□□□□□ -1.72
HMGB3P20-201ENST00000417997 CLRN2A0PK11 232 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 TCP10L2B9ZVM9 353 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 M0QYG6 137 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 PLEKHA8P1O95397 391 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 TTLL1O95922 423 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 PARP1P09874 1014 aaKnown RBP4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 ELFN1P0C7U0 828 aa4.27□□□□□ -1.73
HMGB3P20-201ENST00000417997 FTH1P19P0C7X4 201 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms