RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TDP1Q9NUW8 608 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 TMLHEQ9NVH6 421 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 PKD2L1Q9P0L9 805 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 VPS18Q9P253 973 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 ZNF70Q9UC06 446 aaPredicted RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 RGS17Q9UGC6 210 aaPredicted RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 MTRF1LQ9UGC7 380 aaKnown RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 ARMCX3Q9UH62 379 aaPredicted RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 AMACRQ9UHK6 382 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 BAIAP2L1Q9UHR4 511 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 MAD2L2Q9UI95 211 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 MBD1Q9UIS9 605 aaPredicted RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 OSGIN1Q9UJX0 560 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 AGO2Q9UKV8 859 aaKnown RBP3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 ITGA11Q9UKX5 1188 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 CDH7Q9ULB5 785 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 PCDHA6Q9UN73 950 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 SNX6Q9UNH7 406 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 SLC8A2Q9UPR5 921 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 PCDHA13Q9Y5I0 950 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 B3GALT1Q9Y5Z6 326 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 GMEB1Q9Y692 573 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNE2Q9Y6J6 123 aa3.27□□□□□ -1.89
CTDSPL-203ENST00000416688 KDM3AQ9Y4C1 1321 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 LOC100509620A0A075B734 347 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 GOLGA6L7A0A1B0GV03 622 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 TRBC2A0A5B9 178 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 NPIPB15A6NHN6 443 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 OR6C76A6NM76 312 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CAPN14A8MX76 684 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 STX16-NPEPL1H3BU86 382 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 GCOM1H8Y6P7 765 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PYCARD-AS1I3L0S3 204 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 BTN3A1O00481 513 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 SOX1O00570 391 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 STX16O14662 325 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 IFIT3O14879 490 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 AURKAO14965 403 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ATP2A1O14983 1001 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNQ3O43525 872 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 DNPH1O43598 174 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CIDEAO60543 219 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 FOXD2O60548 495 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 BUB1BO60566 1050 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ADAM11O75078 769 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 SPAG6O75602 509 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CIB2O75838 187 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 IDH1O75874 414 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 RECQL4O94761 1208 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KLHL18O94889 574 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 LETM1O95202 739 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 SIX3O95343 332 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CST3P01034 146 aaPredicted RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 EIF2S1P05198 315 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CD3EP07766 207 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 LTA4HP09960 611 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM157BP0CG42 384 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ARP10275 920 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 RARGP13631 454 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PLS3P13797 630 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PFKLP17858 780 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PRKACBP22694 351 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 DNAJB1P25685 340 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PTPN3P26045 913 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KLRC1P26715 233 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 IL1R2P27930 398 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 LTKP29376 864 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ALDH4A1P30038 563 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CCND2P30279 289 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ALDH1B1P30837 517 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 BMPR1AP36894 532 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 MDH1P40925 334 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 GARSP41250 739 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNJ5P48544 419 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 NRIP1P48552 1158 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 PITPNBP48739 271 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KHKP50053 298 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 NPY4RP50391 375 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 STAT2P52630 851 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 AP3M2P53677 418 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CDH8P55286 799 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 SNU13P55769 128 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 NPEPPSP55786 919 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 EIF3BP55884 814 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 KIAA1024LP59773 190 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ASIC1P78348 528 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CDC42EP1Q00587 391 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 MGAT2Q10469 447 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 TUBB3Q13509 450 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 TRA2AQ13595 282 aaKnown RBP eCLIP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 ALCAMQ13740 583 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 DDX39BQ13838 428 aaKnown RBP3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 GAMTQ14353 236 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 RAB39AQ14964 217 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 RCN1Q15293 331 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 MED22Q15528 200 aa3.26□□□□□ -1.89
CTDSPL-203ENST00000416688 CCDC57Q2TAC2 916 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms