RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PREPLQ4J6C6 727 aaPredicted RBP15.76■□□□□ 0.11
UBXN4-203ENST00000416538 FAM133BQ5BKY9 247 aaKnown RBP15.76■□□□□ 0.11
UBXN4-203ENST00000416538 TRIM65Q6PJ69 517 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 DEFB119Q8N690 84 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 PIGKQ92643 395 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 PRICKLE1Q96MT3 831 aaPredicted RBP15.76■□□□□ 0.11
UBXN4-203ENST00000416538 ABCC13Q9NSE7 274 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 THAP10Q9P2Z0 257 aaPredicted RBP15.76■□□□□ 0.11
UBXN4-203ENST00000416538 CYP8B1Q9UNU6 501 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 TMEM131Q92545 1883 aa15.76■□□□□ 0.11
UBXN4-203ENST00000416538 PCNX2A6NKB5 2137 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 KRT5P13647 590 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 SLC9A1P19634 815 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 ITPKAP23677 461 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 HLA-FP30511 346 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 VASPP50552 380 aaPredicted RBP15.75■□□□□ 0.11
UBXN4-203ENST00000416538 IRX4P78413 519 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 FUT11Q495W5 492 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 PEAR1Q5VY43 1037 aaPredicted RBP15.75■□□□□ 0.11
UBXN4-203ENST00000416538 RNF43Q68DV7 783 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 NADSYN1Q6IA69 706 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 LPCAT2Q7L5N7 544 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 SLC41A1Q8IVJ1 513 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 RNF139Q8WU17 664 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 IRGQQ8WZA9 623 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 MKRN2Q9H000 416 aaKnown RBP15.75■□□□□ 0.11
UBXN4-203ENST00000416538 MIS12Q9H081 205 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 SIX2Q9NPC8 291 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 UBE2TQ9NPD8 197 aaPredicted RBP15.75■□□□□ 0.11
UBXN4-203ENST00000416538 FSCN3Q9NQT6 498 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
UBXN4-203ENST00000416538 GOLGA6L7A0A1B0GV03 622 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 C4orf47A7E2U8 309 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 CDX4O14627 284 aaPredicted RBP15.74■□□□□ 0.11
UBXN4-203ENST00000416538 PITX1P78337 314 aaPredicted RBP15.74■□□□□ 0.11
UBXN4-203ENST00000416538 CETN1Q12798 172 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 ZNF234Q14588 700 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 STILQ15468 1287 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 DPCR1Q3MIW9 517 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 RFWD3Q6PCD5 774 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 NUDT18Q6ZVK8 323 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 DQX1Q8TE96 717 aaKnown RBP15.74■□□□□ 0.11
UBXN4-203ENST00000416538 DDI1Q8WTU0 396 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 MS4A3Q96HJ5 214 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 FCRL2Q96LA5 508 aaPredicted RBP15.74■□□□□ 0.11
UBXN4-203ENST00000416538 HSFY1Q96LI6 401 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 PLXNA2O75051 1894 aa15.74■□□□□ 0.11
UBXN4-203ENST00000416538 CACNA1BQ00975 2339 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 PAPSS1O43252 624 aaPredicted RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 CYBBP04839 570 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 PNMA6AP0CW24 399 aaPredicted RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 HLA-EP13747 358 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 RPL6Q02878 288 aaKnown RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 ADGRF1Q5T601 910 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 SYPL2Q5VXT5 272 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 LYSMD4Q5XG99 296 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 IL31Q6EBC2 164 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 DPY19L2P1Q6NXN4 242 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 KIAA1324Q6UXG2 1013 aaKnown RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 TAC4Q86UU9 113 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 SCUBE3Q8IX30 993 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 ADAM32Q8TC27 787 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 SLC4A5Q9BY07 1137 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 ELOVL2Q9NXB9 296 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 XPO7Q9UIA9 1087 aaKnown RBP15.73■□□□□ 0.11
UBXN4-203ENST00000416538 PILRBQ9UKJ0 227 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 NAALADL1Q9UQQ1 740 aa15.73■□□□□ 0.11
UBXN4-203ENST00000416538 KNL1Q8NG31 2342 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 E5RJQ4 531 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 GIPC1O14908 333 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 KHNYNO15037 678 aaKnown RBP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 MAP3K13O43283 966 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 LATS1O95835 1130 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 CD70P32970 193 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 COPAP53621 1224 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 TBX4P57082 545 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 EIF4HQ15056 248 aaKnown RBP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 PTPRNQ16849 979 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ARHGAP44Q17R89 818 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 MPPE1Q53F39 396 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 TRIM61Q5EBN2 209 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 KIAA0907Q7Z7F0 614 aaPredicted RBP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ADIPOR2Q86V24 386 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 SYT12Q8IV01 421 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ZNF366Q8N895 744 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 CYB5D2Q8WUJ1 264 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ZNF606Q8WXB4 792 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 SHC3Q92529 594 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 SLC39A13Q96H72 371 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 LMLNQ96KR4 655 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms