RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 SERPINA13PQ6UXR4 307 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 CEP57L1Q8IYX8 460 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 TAS1R2Q8TE23 839 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 DDI1Q8WTU0 396 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 HNRNPLLQ8WVV9 542 aaKnown RBP16.12■□□□□ 0.17
DDX56-202ENST00000415758 SORCS1Q8WY21 1168 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 CIPCQ9C0C6 399 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 TMEM245Q9H330 911 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 MARCH2Q9P0N8 246 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 STRIP2Q9ULQ0 834 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 BTBD3Q9Y2F9 522 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.12■□□□□ 0.17
DDX56-202ENST00000415758 SLCO1B1Q9Y6L6 691 aa16.12■□□□□ 0.17
DDX56-202ENST00000415758 KNTC1P50748 2209 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 TNFSF14O43557 240 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 PCDHGA12O60330 932 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 KIF20AO95235 890 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 ACSL1P33121 698 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 GRIA4P48058 902 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 PPP3CAQ08209 521 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 TRIP4Q15650 581 aaPredicted RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 SMAD1Q15797 465 aaKnown RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 PTPRNQ16849 979 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 KIF19Q2TAC6 998 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 INTS8Q75QN2 995 aaKnown RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 KIAA0907Q7Z7F0 614 aaPredicted RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 PLD4Q96BZ4 506 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 PAGE5Q96GU1 130 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 C6orf106Q9H6K1 298 aaPredicted RBP16.11■□□□□ 0.17
DDX56-202ENST00000415758 FBRSQ9HAH7 460 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 STOML2Q9UJZ1 356 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 TMEM131Q92545 1883 aa16.11■□□□□ 0.17
DDX56-202ENST00000415758 ASXL3Q9C0F0 2248 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 A0A087WV48 116 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 SLC12A8A0AV02 714 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 TRABD2BA6NFA1 517 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 PAPSS1O43252 624 aaPredicted RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 MYL1P05976 194 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 CD58P19256 250 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 HOXD9P28356 352 aaPredicted RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 GCLMP48507 274 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 ZNF445P59923 1031 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 YWHAGP61981 247 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX56-202ENST00000415758 ARID5AQ03989 594 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 TEAD4Q15561 434 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 MPPE1Q53F39 396 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 ATL3Q6DD88 541 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 FAM124AQ86V42 546 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 PIGZQ86VD9 579 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 SCUBE3Q8IX30 993 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 IGSF8Q969P0 613 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 BBC3Q96PG8 261 aaPredicted RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 LHX5Q9H2C1 402 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 TM9SF3Q9HD45 589 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 PLA2G4CQ9UP65 541 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 ANKRD6Q9Y2G4 727 aa16.1■□□□□ 0.17
DDX56-202ENST00000415758 GCN1Q92616 2671 aaKnown RBP16.1■□□□□ 0.17
DDX56-202ENST00000415758 MUC22E2RYF6 1773 aaPredicted RBP16.09■□□□□ 0.17
DDX56-202ENST00000415758 E9PAM4 449 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 TSPAN3O60637 253 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 HLA-EP13747 358 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 HLA-FP30511 346 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 GRK6P43250 576 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 ME1P48163 572 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 CYP4F3Q08477 520 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX56-202ENST00000415758 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
DDX56-202ENST00000415758 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 WFIKKN2Q8TEU8 576 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 BIRC7Q96CA5 298 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 LRIG1Q96JA1 1093 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 BTBD1Q9H0C5 482 aa16.09■□□□□ 0.17
DDX56-202ENST00000415758 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX56-202ENST00000415758 DFNA5O60443 496 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 SEMA4FO95754 770 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 ZBED1O96006 694 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 TRIM49P0CI25 452 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 TRIM49CP0CI26 452 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 NR2F2P24468 414 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 CD27P26842 260 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 GTF2H1P32780 548 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 HARS2P49590 506 aaKnown RBP16.08■□□□□ 0.16
DDX56-202ENST00000415758 RAD23BP54727 409 aa16.08■□□□□ 0.16
DDX56-202ENST00000415758 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms