RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PRPF39Q86UA1 669 aaKnown RBP17.72■□□□□ 0.43
PHRF1-202ENST00000413872 PLEKHA8Q96JA3 519 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 TKTL2Q9H0I9 626 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 CTNNAL1Q9UBT7 734 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 TM9SF1O15321 606 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 ZW10O43264 779 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 ADH1AP07327 375 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 USP17L7P0C7H9 530 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 AMPD1P23109 780 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
PHRF1-202ENST00000413872 LRRC49Q8IUZ0 686 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 TRAV19A0A0A6YYK7 116 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 SNHG28P0DPA3 235 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 PGAM1P18669 254 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 GP5P40197 560 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 FLT3LGP49771 235 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 PRKAA2P54646 552 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 KDM7AQ6ZMT4 941 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 MOB2Q70IA6 237 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 MTMR8Q96EF0 704 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 OLFM3Q96PB7 478 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 ECSITQ9BQ95 431 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 RAD18Q9NS91 495 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 USP20Q9Y2K6 914 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 TSPAN3O60637 253 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 EPB42P16452 691 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 DDX39BQ13838 428 aaKnown RBP17.72■□□□□ 0.43
PHRF1-202ENST00000413872 BMT2Q1RMZ1 405 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 PDPK2PQ6A1A2 396 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 MYCBPQ99417 103 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-202ENST00000413872 ST3GAL5Q9UNP4 418 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 DTNAQ9Y4J8 743 aa17.72■□□□□ 0.43
PHRF1-202ENST00000413872 ERBB2P04626 1255 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 POLR2EP19388 210 aaKnown RBP17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CYP2A7P20853 494 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 COPAP53621 1224 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CNGA3Q16281 694 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 GRTP1Q5TC63 336 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 METTL3Q86U44 580 aaKnown RBP17.71■□□□□ 0.43
PHRF1-202ENST00000413872 BBS7Q8IWZ6 715 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 EPS8L1Q8TE68 723 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 ANKRD7Q92527 254 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 MAGEB18Q96M61 343 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 SYT17Q9BSW7 474 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 POLR1EQ9GZS1 481 aaKnown RBP17.71■□□□□ 0.43
PHRF1-202ENST00000413872 DNMT3LQ9UJW3 386 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 NFICP08651 508 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CHKAP35790 457 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 TREML2Q5T2D2 321 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 LRRC8BQ6P9F7 803 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CLEC4FQ8N1N0 589 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 TMEM159Q96B96 161 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 NFKBIZQ9BYH8 718 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 APPL1Q9UKG1 709 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 PRIM2P49643 509 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 FLOT2Q14254 428 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 HYIQ5T013 277 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CCDC33Q8N5R6 958 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 LRRC39Q96DD0 335 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 PANX3Q96QZ0 392 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 TSEN34Q9BSV6 310 aaKnown RBP17.71■□□□□ 0.43
PHRF1-202ENST00000413872 THTPAQ9BU02 230 aa17.71■□□□□ 0.43
PHRF1-202ENST00000413872 CAND2O75155 1236 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 FARP2O94887 1054 aaPredicted RBP17.71■□□□□ 0.42
PHRF1-202ENST00000413872 RPN2P04844 631 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 THRAP10827 490 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 DNAJC3Q13217 504 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 MFSD7Q6UXD7 560 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 ZNF438Q7Z4V0 828 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 ANKRD52Q8NB46 1076 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 ASAH2Q9NR71 780 aa17.71■□□□□ 0.42
PHRF1-202ENST00000413872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-202ENST00000413872 RNF103O00237 685 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 SERPINA4P29622 427 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 POLE2P56282 527 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 ARMC12Q5T9G4 340 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 B3GALNT2Q8NCR0 500 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 ABHD8Q96I13 439 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 PPP1R16AQ96I34 528 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 CASZ1Q86V15 1759 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 ASTN1O14525 1302 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 OR6C75A6NL08 312 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 F8W810 466 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 OR56A5P0C7T3 313 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 CPA3P15088 417 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 CRABP2P29373 138 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 C12orf56Q8IXR9 622 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 CCDC134Q9H6E4 229 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 O00370 1275 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 TBC1D4O60343 1298 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 ATP9AO75110 1047 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 MMP13P45452 471 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 CDK16Q00536 496 aa17.7■□□□□ 0.42
PHRF1-202ENST00000413872 SEL1L3Q68CR1 1132 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms