RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 ELF2Q15723 593 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 FYB2Q5VWT5 728 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 DENND1CQ8IV53 801 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 AHI1Q8N157 1196 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 WDTC1Q8N5D0 677 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP54-202ENST00000413442 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 IL17RCQ8NAC3 791 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 TTC16Q8NEE8 873 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 TSTD1Q8NFU3 115 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 FIBINQ8TAL6 211 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 TTC8Q8TAM2 541 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 DDI1Q8WTU0 396 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 DDX1Q92499 740 aaKnown RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 KAT5Q92993 513 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 NT5C3BQ969T7 300 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 FAM149B1Q96BN6 582 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 SLC2A13Q96QE2 648 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 ZSWIM1Q9BR11 485 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 PCED1AQ9H1Q7 454 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 SYNCQ9H7C4 482 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 RTN4Q9NQC3 1192 aaKnown RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 DNAJC17Q9NVM6 304 aaKnown RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 ELOVL2Q9NXB9 296 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 NCDNQ9UBB6 729 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 PLXND1Q9Y4D7 1925 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 MYO18AQ92614 2054 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 EIF3CLB5ME19 914 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 E5RJQ4 531 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 NEDD8-MDP1E9PL57 170 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 F8VZ95 297 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 GOLGA6L19H0YKK7 550 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 TULP2O00295 520 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 PAPSS1O43252 624 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 RPP40O75818 363 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 GABBR2O75899 941 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 ENDOD1O94919 500 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 TRUB2O95900 331 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 ERBB2P04626 1255 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 CALB1P05937 261 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 FYNP06241 537 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SRPRAP08240 638 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 IRF1P10914 325 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 GZMAP12544 262 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 OXTRP30559 389 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 HOXC13P31276 330 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SLC6A11P48066 632 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 PGFP49763 221 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 RGS7P49802 495 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 AIF1P55008 147 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 JAM2P57087 298 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 LMNB2Q03252 620 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 ARID5AQ03989 594 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 STARD3Q14849 445 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 NCAPHQ15003 741 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SLC25A52Q3SY17 297 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 C5orf22Q49AR2 442 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 C2orf27AQ580R0 203 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 DCAF6Q58WW2 860 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 RABGAP1LQ5R372 815 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 C10orf76Q5T2E6 689 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 PIK3R6Q5UE93 754 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 DENND1BQ6P3S1 775 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 TPGS1Q6ZTW0 290 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 CEP68Q76N32 757 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 ANKS1BQ7Z6G8 1248 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 HJURPQ8NCD3 748 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 OLIG1Q8TAK6 271 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 DQX1Q8TE96 717 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 EDEM1Q92611 657 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SYN2Q92777 582 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 PIWIL1Q96J94 861 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 SPACA7Q96KW9 195 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 PCMTD1Q96MG8 357 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 HAPLN3Q96S86 360 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 EIF3CQ99613 913 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 GABRG3Q99928 467 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 GANQ9H2C0 597 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 WDCPQ9H6R7 721 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 RBM12Q9NTZ6 932 aaKnown RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP54-202ENST00000413442 TMEM63CQ9P1W3 806 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 THAP10Q9P2Z0 257 aaPredicted RBP6.64□□□□□ -1.35
USP54-202ENST00000413442 TJP2Q9UDY2 1190 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 NUDT5Q9UKK9 219 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 SIK3Q9Y2K2 1263 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 RALGAPA1Q6GYQ0 2036 aa6.64□□□□□ -1.35
USP54-202ENST00000413442 TARSL2A2RTX5 802 aaKnown RBP6.63□□□□□ -1.35
USP54-202ENST00000413442 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
USP54-202ENST00000413442 AP5Z1O43299 807 aa6.63□□□□□ -1.35
USP54-202ENST00000413442 HRO43593 1189 aa6.63□□□□□ -1.35
USP54-202ENST00000413442 SYNCRIPO60506 623 aaKnown RBP6.63□□□□□ -1.35
USP54-202ENST00000413442 CLDN11O75508 207 aa6.63□□□□□ -1.35
USP54-202ENST00000413442 DAB1O75553 588 aa6.63□□□□□ -1.35
USP54-202ENST00000413442 SERPINC1P01008 464 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms