RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZNF687Q8N1G0 1237 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 SMG8Q8ND04 991 aaKnown RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 ATL2Q8NHH9 583 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 JOSD2Q8TAC2 188 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 STK32AQ8WU08 396 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 ART4Q93070 314 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 B3GALT6Q96L58 329 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 KXD1Q9BQD3 176 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 FRMD8P1Q9BZ68 369 aaPredicted RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 CXCL16Q9H2A7 254 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 CYLDQ9NQC7 956 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 CHST7Q9NS84 486 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 hCG_1818297A0A087WSY0 165 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 DPYSL4O14531 572 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 LRCH4O75427 683 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 SKIP12755 728 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 AKAP5P24588 427 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 PCK1P35558 622 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 TAF6P49848 677 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
PTPRC-206ENST00000413409 DSG1Q02413 1049 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 CAV1Q03135 178 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
PTPRC-206ENST00000413409 TAZQ16635 292 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 GLRA4Q5JXX5 417 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 PRR23BQ6ZRT6 265 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 FBXO25Q8TCJ0 367 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 FGF13Q92913 245 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 NELL2Q99435 816 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 SSX2IPQ9Y2D8 614 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 R3HDM2Q9Y2K5 976 aaKnown RBP17.81■□□□□ 0.44
PTPRC-206ENST00000413409 NFS1Q9Y697 457 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 F5P12259 2224 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 WDFY3Q8IZQ1 3526 aa17.81■□□□□ 0.44
PTPRC-206ENST00000413409 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
PTPRC-206ENST00000413409 HRO43593 1189 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 POMCP01189 267 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 TCF4P15884 667 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 FLT3P36888 993 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 SCNN1AP37088 669 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 KCNJ1P48048 391 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 PLTPP55058 493 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 PFKPQ01813 784 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 CALCOCO2Q13137 446 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 TTMPQ5BVD1 217 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 TFDP3Q5H9I0 405 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 FAM102AQ5T9C2 384 aaPredicted RBP17.8■□□□□ 0.44
PTPRC-206ENST00000413409 MRPL10Q7Z7H8 261 aaKnown RBP17.8■□□□□ 0.44
PTPRC-206ENST00000413409 ZDHHC17Q8IUH5 632 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 BBOF1Q8ND07 529 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 ITFG1Q8TB96 612 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 URGCPQ8TCY9 931 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 CCHCR1Q8TD31 782 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 ATG4AQ8WYN0 398 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 SNF8Q96H20 258 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 SLC4A5Q9BY07 1137 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 ASNSD1Q9NWL6 643 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 NEU2Q9Y3R4 380 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 AKAP13Q12802 2813 aa17.8■□□□□ 0.44
PTPRC-206ENST00000413409 RALGAPA1Q6GYQ0 2036 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA6L10A6NI86 522 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 NCAM2O15394 837 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 C1RP00736 705 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 NUDT17P0C025 328 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
PTPRC-206ENST00000413409 ITIH2P19823 946 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 GPD1P21695 349 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 CDKN2BP42772 138 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 ZNF143P52747 638 aaPredicted RBP17.79■□□□□ 0.44
PTPRC-206ENST00000413409 GYS2P54840 703 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 SRSF5Q13243 272 aaKnown RBP17.79■□□□□ 0.44
PTPRC-206ENST00000413409 SOWAHAQ2M3V2 549 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 FAM183BPQ6ZVS7 135 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 MTSS1LQ765P7 747 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 DPH6Q7L8W6 267 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 COLGALT2Q8IYK4 626 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 CRYBG2Q8N1P7 616 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 TOP6BLQ8N6T0 577 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 UBA3Q8TBC4 463 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
PTPRC-206ENST00000413409 KBTBD7Q8WVZ9 684 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 RNF25Q96BH1 459 aaPredicted RBP17.79■□□□□ 0.44
PTPRC-206ENST00000413409 NCAPGQ9BPX3 1015 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 CNPY3Q9BT09 278 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 HEMGNQ9BXL5 484 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 TSPYL1Q9H0U9 437 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 TMBIM4Q9HC24 238 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 HEBP1Q9NRV9 189 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 ASIC3Q9UHC3 531 aa17.79■□□□□ 0.44
PTPRC-206ENST00000413409 FLNBO75369 2602 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms