RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 K7ENM7 598 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 GABRDO14764 452 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 VILLO15195 856 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 SEMA4FO95754 770 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PIGRP01833 764 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 ITGB3P05106 788 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 KRT19P08727 400 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PDGFRBP09619 1106 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CISD3P0C7P0 127 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CKMT2P17540 419 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 YWHAQP27348 245 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 BCAT1P54687 386 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 NCKAP1LP55160 1127 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CDH8P55286 799 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 GABREP78334 506 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 INSM1Q01101 510 aaPredicted RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 ORC2Q13416 577 aaPredicted RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 PNOCQ13519 176 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 RILPL1Q5EBL4 403 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 TTC38Q5R3I4 469 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 SLC39A4Q6P5W5 647 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CSGALNACT2Q8N6G5 542 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 EXD3Q8N9H8 876 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PDZD8Q8NEN9 1154 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 ZNF397Q8NF99 534 aaPredicted RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 KIF18AQ8NI77 898 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 SAP25Q8TEE9 199 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 UCMAQ8WVF2 138 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 FBXO32Q969P5 355 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 WBP2Q969T9 261 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 SKA1Q96BD8 255 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PPP1R13BQ96KQ4 1090 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 LHX5Q9H2C1 402 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 FOXP1Q9H334 677 aaPredicted RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 CCSER2Q9H7U1 834 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CRTAC1Q9NQ79 661 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 PLK2Q9NYY3 685 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CHORDC1Q9UHD1 332 aaPredicted RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 AGO2Q9UKV8 859 aaKnown RBP7.3□□□□□ -1.24
LSM8-202ENST00000411938 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PCDHB1Q9Y5F3 818 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 CENPEQ02224 2701 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 POLQO75417 2590 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 ICE1Q9Y2F5 2266 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 MYH11P35749 1972 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 TISP43B9A030 160 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 ANKRD63C9JTQ0 380 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 K7ENP7 123 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 NPC1O15118 1278 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 TSPAN3O60637 253 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 IL18RAPO95256 599 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 SLU7O95391 586 aaKnown RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 AFPP02771 609 aaKnown RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 EPHX1P07099 455 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 PRKCHP24723 683 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 LMO2P25791 158 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 ARRB1P49407 418 aaPredicted RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 COPAP53621 1224 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 ERVPABLB-1P60509 514 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 E2F1Q01094 437 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 SERINC3Q13530 473 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 SOWAHAQ2M3V2 549 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 MDH1BQ5I0G3 518 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 E4F1Q66K89 784 aaPredicted RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 SLFN12LQ6IEE8 588 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 INO80CQ6PI98 192 aaPredicted RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 CCDC81Q6ZN84 652 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 NT5DC4Q86YG4 428 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 VSTM4Q8IW00 320 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 MYCT1Q8N699 235 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 LRRC52Q8N7C0 313 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 C1orf127Q8N9H9 656 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 RFFLQ8WZ73 363 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 PCED1BQ96HM7 432 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 PLIN2Q99541 437 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 DUSP9Q99956 384 aaKnown RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 ARHGAP9Q9BRR9 750 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 BTBD1Q9H0C5 482 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 HSD3B7Q9H2F3 369 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 L2HGDHQ9H9P8 463 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.29□□□□□ -1.24
LSM8-202ENST00000411938 AASDHPPTQ9NRN7 309 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 THSD1Q9NS62 852 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 WDR70Q9NW82 654 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 GDAP2Q9NXN4 497 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 THAP10Q9P2Z0 257 aaPredicted RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 FBXO2Q9UK22 296 aaPredicted RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 LSM7Q9UK45 103 aaKnown RBP7.29□□□□□ -1.24
LSM8-202ENST00000411938 SRPK3Q9UPE1 567 aa7.29□□□□□ -1.24
LSM8-202ENST00000411938 ITPR2Q14571 2701 aa7.28□□□□□ -1.24
LSM8-202ENST00000411938 FAM47DPA6NHR8 397 aa7.28□□□□□ -1.24
LSM8-202ENST00000411938 YKT6O15498 198 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms