RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 DNAAF2Q9NVR5 837 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF446Q9NWS9 450 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 TBC1D14Q9P2M4 693 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 CYP8B1Q9UNU6 501 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 SIK3Q9Y2K2 1263 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 BPTFQ12830 3046 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 PRRT4C9JH25 899 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 H0Y626 953 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 HOXC11O43248 304 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TACC1O75410 805 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 KIF20AO95235 890 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TRIM16O95361 564 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 IRF1P10914 325 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 MAOBP27338 520 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 YWHAQP27348 245 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 DPP6P42658 865 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ANO4Q32M45 955 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 PAQR9Q6ZVX9 377 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TERB1Q8NA31 727 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 EHBP1Q8NDI1 1231 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF516Q92618 1163 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ELMO3Q96BJ8 720 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 HSPA12BQ96MM6 686 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 CEP63Q96MT8 703 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 NDST4Q9H3R1 872 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 HSPBP1Q9NZL4 362 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 DEC1Q9P2X7 70 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 RAD54BQ9Y620 910 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 GREM1O60565 184 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ZRANB2O95218 330 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 NTSR1P30989 418 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF423Q2M1K9 1284 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 SLCO6A1Q86UG4 719 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 WDR49Q8IV35 697 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 EHD2Q9NZN4 543 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 GMIPQ9P107 970 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 STARD13Q9Y3M8 1113 aa13.36□□□□□ -0.27
CHRNA1-205ENST00000409542 WASH3PC4AMC7 463 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 GNA14O95837 355 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 KLK7P49862 253 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 CDH8P55286 799 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 FKBP3Q00688 224 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 ALCAMQ13740 583 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 PLEKHG6Q3KR16 790 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 WDR72Q3MJ13 1102 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 HECTD3Q5T447 861 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 SNX30Q5VWJ9 437 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 BTBD8Q5XKL5 378 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 B3GALNT2Q8NCR0 500 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 ADAMTS14Q8WXS8 1223 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF419Q96HQ0 510 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 ELOVL4Q9GZR5 314 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
CHRNA1-205ENST00000409542 IGSF10Q6WRI0 2623 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 A8MXQ7 604 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 CLIC2O15247 247 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 BEST1O76090 585 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 IPO7O95373 1038 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 TBX18O95935 607 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 SYPP08247 313 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 SLC5A3P53794 718 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 MYL6P60660 151 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 SURF1Q15526 300 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 CCNI2Q6ZMN8 369 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 PDZD3Q86UT5 571 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 NAXDQ8IW45 347 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 PDZD8Q8NEN9 1154 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 MDM1Q8TC05 714 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms