RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PANX3Q96QZ0 392 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 LGMNQ99538 433 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 LBHD1Q9BQE6 289 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 MIS12Q9H081 205 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 PCMTD2Q9NV79 361 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 CXCL11O14625 94 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 BEST1O76090 585 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 ACADSP16219 412 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 SOX4Q06945 474 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 CDK18Q07002 472 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 PDE1CQ14123 709 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 TEDDM1Q5T9Z0 273 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 MROH9Q5TGP6 573 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 MARK2Q7KZI7 788 aaKnown RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 SESTD1Q86VW0 696 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 CFAP61Q8NHU2 1237 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 DPF3Q92784 378 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 FRMD8Q9BZ67 464 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 SLC13A1Q9BZW2 595 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 MMADHCQ9H3L0 296 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 DCLRE1BQ9H816 532 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 FZD10Q9ULW2 581 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 WDR27A2RRH5 827 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 PIRO00625 290 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 LYPLA1O75608 230 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 GSTA2P09210 222 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 CYP2C8P10632 490 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 SDC4P31431 198 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 MAGEA12P43365 314 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 WASHC5Q12768 1159 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 PPIL2Q13356 520 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 NAA25Q14CX7 972 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 TAF11Q15544 211 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 GLRA4Q5JXX5 417 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 KIAA0319Q5VV43 1072 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 DENND5BQ6ZUT9 1274 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 PAQR9Q6ZVX9 377 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 NT5DC4Q86YG4 428 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 TMEM40Q8WWA1 233 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 FAM167BQ9BTA0 163 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 KLC2Q9H0B6 622 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 AP4E1Q9UPM8 1137 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 CSADQ9Y600 493 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 F5H423 210 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 PSMG1O95456 288 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 UBAP2LQ14157 1087 aaKnown RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 RCN1Q15293 331 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 APBB1IPQ7Z5R6 666 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 ARID3BQ8IVW6 561 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 STKLD1Q8NE28 680 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 UCMAQ8WVF2 138 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 E2F7Q96AV8 911 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 OPTNQ96CV9 577 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 SYT15Q9BQS2 421 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 CCDC189A1A4V9 331 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 SORBS2O94875 1100 aaKnown RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 FYNP06241 537 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 SETSIPP0DME0 302 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 MDH1BQ5I0G3 518 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 C16orf46Q6P387 395 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 OSTM1Q86WC4 334 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 FCRL3Q96P31 734 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 MROH8Q9H579 483 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 MARCOQ9UEW3 520 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 CORO1CQ9ULV4 474 aaPredicted RBP10.16□□□□□ -0.78
MSH2-202ENST00000406134 DERAQ9Y315 318 aa10.16□□□□□ -0.78
MSH2-202ENST00000406134 PRR5-ARHGAP8B1AHC4 643 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 P4HA1P13674 534 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 RASSF2P50749 326 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 ARHGAP8P85298 464 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 KCTD2Q14681 263 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 GRIK4Q16099 956 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 XKR4Q5GH76 650 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 FOXB2Q5VYV0 432 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 CTAGE3PQ8IX95 158 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 CRYBG2Q8N1P7 616 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 TEX9Q8N6V9 391 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 RAB3IL1Q8TBN0 382 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 ISL2Q96A47 359 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 OXCT2Q9BYC2 517 aaPredicted RBP10.15□□□□□ -0.78
MSH2-202ENST00000406134 CEP41Q9BYV8 373 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 TMEM30AQ9NV96 361 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 BIRC5O15392 142 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 SMPD1P17405 629 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 SCNN1AP37088 669 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 AQP5P55064 265 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 LAMC2Q13753 1193 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 DPYSQ14117 519 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 STILQ15468 1287 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 KIZQ2M2Z5 673 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 NDUFAF2Q8N183 169 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 ARRDC4Q8NCT1 418 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms