RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 RBL1P28749 1068 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 OR1D2P34982 312 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 XRCC4Q13426 336 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 UBAP2Q5T6F2 1119 aaKnown RBP26.53■■□□□ 1.84
CPNE1-205ENST00000401607 C16orf59Q7L2K0 433 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 CCDC25Q86WR0 208 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 OR2W6PQ8NHA6 318 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 RTP4Q96DX8 246 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 OLFM3Q96PB7 478 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 ARHGEF38Q9NXL2 777 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 SNX10Q9Y5X0 201 aa26.53■■□□□ 1.84
CPNE1-205ENST00000401607 C2CD2LO14523 706 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 DCLK1O15075 740 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 MSI1O43347 362 aaKnown RBP26.52■■□□□ 1.84
CPNE1-205ENST00000401607 MFSD11O43934 449 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 RTN3O95197 1032 aaPredicted RBP26.52■■□□□ 1.84
CPNE1-205ENST00000401607 LAG3P18627 525 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 YWHAQP27348 245 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 KIAA1841Q6NSI8 718 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 ARHGAP18Q8N392 663 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 LRRN4Q8WUT4 740 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 TMEM169Q96HH4 297 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 CLSTN3Q9BQT9 956 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 HERC2P3Q9BVR0 1158 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 FARP1Q9Y4F1 1045 aaPredicted RBP26.52■■□□□ 1.84
CPNE1-205ENST00000401607 GREB1Q4ZG55 1949 aa26.52■■□□□ 1.84
CPNE1-205ENST00000401607 CFAP69A5D8W1 941 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 ATF6P18850 670 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 MORF4L2Q15014 288 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 MSANTD2Q6P1R3 559 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 KCNN4O15554 427 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 OPA1O60313 960 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 EN2P19622 333 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 HCAR3P49019 387 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 RPL10AP62906 217 aaKnown RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 DSG1Q02413 1049 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 PAFAH1B3Q15102 231 aaKnown RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 SLC45A4Q5BKX6 768 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 CDKL3Q8IVW4 592 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 ZCCHC9Q8N567 271 aaKnown RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 CCDC33Q8N5R6 958 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 RNF34Q969K3 372 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 FBXO32Q969P5 355 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 QKIQ96PU8 341 aaKnown RBP eCLIP26.51■■□□□ 1.836e-7■■■□□ 15.2
CPNE1-205ENST00000401607 TSPYL1Q9H0U9 437 aa26.51■■□□□ 1.83
CPNE1-205ENST00000401607 DNAJC17Q9NVM6 304 aaKnown RBP26.51■■□□□ 1.83
CPNE1-205ENST00000401607 KIAA1671Q9BY89 1806 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 POLR3GO15318 223 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-205ENST00000401607 RNF40O75150 1001 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 TPI1P60174 286 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 BRMS1LQ5PSV4 323 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 FAM182AQ5T1J6 154 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 CPT1BQ92523 772 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 PRCCQ92733 491 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-205ENST00000401607 YME1L1Q96TA2 773 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 CDC42EP4Q9H3Q1 356 aaKnown RBP26.5■■□□□ 1.83
CPNE1-205ENST00000401607 COMMD8Q9NX08 183 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 SPG21Q9NZD8 308 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 SHOC2Q9UQ13 582 aa26.5■■□□□ 1.83
CPNE1-205ENST00000401607 RIPK2O43353 540 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 ERCC2P18074 760 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 GLUD2P49448 558 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 ZNF844Q08AG5 666 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 TAF10Q12962 218 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 GIPC2Q8TF65 315 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 ARL8AQ96BM9 186 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 FOXP3Q9BZS1 431 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 OSBPL2Q9H1P3 480 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 OR12D3Q9UGF7 316 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 ALPK3Q96L96 1907 aa26.49■■□□□ 1.83
CPNE1-205ENST00000401607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 NDC80O14777 642 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 NUDT17P0C025 328 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 ZNF135P52742 658 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 CEP85LQ5SZL2 805 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 TRMT10CQ7L0Y3 403 aaKnown RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 PCGF5Q86SE9 256 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 NAT8LQ8N9F0 302 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 SERPINB11Q96P15 392 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 CLIC5Q9NZA1 410 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 SLC38A8A6NNN8 435 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 LRIG2O94898 1065 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 CCR1P32246 355 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 PPP2R5DQ14738 602 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 TTMPQ5BVD1 217 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 RASIP1Q5U651 963 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 ANKRD22Q5VYY1 191 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 DDX53Q86TM3 631 aaKnown RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 PPIL6Q8IXY8 311 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 TAB3Q8N5C8 712 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 EPAS1Q99814 870 aa26.48■■□□□ 1.83
CPNE1-205ENST00000401607 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 AFF4Q9UHB7 1163 aaKnown RBP26.48■■□□□ 1.83
CPNE1-205ENST00000401607 SLC29A2Q14542 456 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 DENND2CQ68D51 928 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 RELL1Q8IUW5 271 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 NETO2Q8NC67 525 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 HAPLN3Q96S86 360 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 TTLL2Q9BWV7 592 aa26.47■■□□□ 1.83
CPNE1-205ENST00000401607 MCOLN1Q9GZU1 580 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms