RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 PRIM2P49643 509 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 BNC2Q6ZN30 1099 aaPredicted RBP18.65■□□□□ 0.58
COL18A1-204ENST00000400337 SERPINB11Q96P15 392 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ATXN3LQ9H3M9 355 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 TSPAN3O60637 253 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 RBL1P28749 1068 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 KIAA0319LQ8IZA0 1049 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ELOVL4Q9GZR5 314 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 TAGLN3Q9UI15 199 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 DTNAQ9Y4J8 743 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ITGA9Q13797 1035 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 POPDC2Q9HBU9 364 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 SLCO1B7G3V0H7 640 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 PGAM1P18669 254 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 YWHAQP27348 245 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ACAP1Q15027 740 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 PHF21BQ96EK2 531 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ABHD8Q96I13 439 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 ULBP1Q9BZM6 244 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 DLGAP2Q9P1A6 1054 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 HNRNPRO43390 633 aaKnown RBP18.64■□□□□ 0.58
COL18A1-204ENST00000400337 KDM1AO60341 852 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 ATP9AO75110 1047 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 ALBP02768 609 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 ZSCAN5DPP0CG00 497 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 ALOX15P16050 662 aaPredicted RBP18.64■□□□□ 0.58
COL18A1-204ENST00000400337 ITGB5P18084 799 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 DGKZQ13574 1117 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 PKN2Q16513 984 aaKnown RBP18.64■□□□□ 0.58
COL18A1-204ENST00000400337 PDPK2PQ6A1A2 396 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 APBB2Q92870 758 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 SENP8Q96LD8 212 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 GPRC5DQ9NZD1 345 aa18.64■□□□□ 0.58
COL18A1-204ENST00000400337 SAE1Q9UBE0 346 aaPredicted RBP18.64■□□□□ 0.58
COL18A1-204ENST00000400337 NFICP08651 508 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 PPIL2Q13356 520 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 SLC39A12Q504Y0 691 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 ARMC6Q6NXE6 501 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 ADCK1Q86TW2 530 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 P3H2Q8IVL5 708 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 GANQ9H2C0 597 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 ATP13A1Q9HD20 1204 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 KDELR1P24390 212 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TM4SF1P30408 202 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 C15orf59Q2T9L4 293 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-204ENST00000400337 LNX1Q8TBB1 728 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-204ENST00000400337 CDK5RAP1Q96SZ6 601 aaKnown RBP18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TKTL2Q9H0I9 626 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 CAAP1Q9H8G2 361 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 NUDT5Q9UKK9 219 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TRHDEQ9UKU6 1024 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 NR5A2O00482 541 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 WNT7AO00755 349 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 LTFP02788 710 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TPBGLP0DKB5 382 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 NFYCQ13952 458 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-204ENST00000400337 PLD3Q8IV08 490 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 DDX20Q9UHI6 824 aaKnown RBP18.64■□□□□ 0.57
COL18A1-204ENST00000400337 FER1L4A9Z1Z3 1794 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 SASH3O75995 380 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 VAPBO95292 243 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 MPOP05164 745 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 ETNPPLQ8TBG4 499 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 CNBD2Q96M20 576 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 NMRK1Q9NWW6 199 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 HES2Q9Y543 173 aa18.64■□□□□ 0.57
COL18A1-204ENST00000400337 GRTP1Q5TC63 336 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 ADAM2Q99965 735 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-204ENST00000400337 F8W810 466 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 PDE2AO00408 941 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-204ENST00000400337 ATP6V1B1P15313 513 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 DPYSL3Q14195 570 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 RRP1BQ14684 758 aaKnown RBP18.63■□□□□ 0.57
COL18A1-204ENST00000400337 RETSATQ6NUM9 610 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 HSD17B14Q9BPX1 270 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 APPL1Q9UKG1 709 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 TNFSF13BQ9Y275 285 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 DSG1Q02413 1049 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 ITIH5Q86UX2 942 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 STX19Q8N4C7 294 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
COL18A1-204ENST00000400337 SRPK1Q96SB4 655 aaKnown RBP18.63■□□□□ 0.57
COL18A1-204ENST00000400337 RXFP1Q9HBX9 757 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 GOLGA8TH3BQL2 631 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 TBC1D12O60347 775 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 USP12O75317 370 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 LZTR1Q8N653 840 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 JADE3Q92613 823 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 SCN3BQ9NY72 215 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 ZNF229Q9UJW7 825 aa18.63■□□□□ 0.57
COL18A1-204ENST00000400337 SNX13Q9Y5W8 968 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms