RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 PPATQ06203 517 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 TWF1Q12792 350 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 N4BP2L1Q5TBK1 243 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 STRA8Q7Z7C7 330 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 TMC2Q8TDI7 906 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 IDI2Q9BXS1 227 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 FAM192AQ9GZU8 254 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 AVENQ9NQS1 362 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 IARS2Q9NSE4 1012 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 STX11O75558 287 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 MFN2O95140 757 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 HMBSP08397 361 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ROR2Q01974 943 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 AUHQ13825 339 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ARMC3Q5W041 872 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 WDR59Q6PJI9 974 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SLC30A10Q6XR72 485 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 TDRD5Q8NAT2 981 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 WDR36Q8NI36 951 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CDRT15Q96T59 188 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SEPHS2Q99611 448 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 EMILIN2Q9BXX0 1053 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SERHL2Q9H4I8 314 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SERHLQ9NQF3 203 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PNMA8BQ9ULN7 279 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 FMN2Q9NZ56 1722 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PNMA8CA0A1B0GUJ8 204 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 DYTNA2CJ06 578 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 FAM86B1E9PN63 330 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 DNALI1O14645 258 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PRRG1O14668 218 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ECDO95905 644 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 FAM86B2P0C5J1 330 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GARTP22102 1010 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ETFBP38117 255 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 MAGEA10P43363 369 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GEMP55040 296 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 C21orf59P57076 290 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 RPS7P62081 194 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GOLGA7BQ2TAP0 167 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 MIER2Q8N344 545 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 OR6Y1Q8NGX8 325 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SPRTNQ9H040 489 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GANQ9H2C0 597 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 MYOZ2Q9NPC6 264 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 SAR1AQ9NR31 198 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PACSIN3Q9UKS6 424 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PIN4Q9Y237 131 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 VPS26AO75436 327 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MAPTP10636 758 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ETS2P15036 469 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ITGAXP20702 1163 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PPP2R1BP30154 601 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CSE1LP55060 971 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MRPS22P82650 360 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CDK16Q00536 496 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MCL1Q07820 350 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 NFYCQ13952 458 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 APOBEC3HQ6NTF7 200 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SV2AQ7L0J3 742 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CD302Q8IX05 232 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 NOL6Q9H6R4 1146 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 DNAJC18Q9H819 358 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TRPC7Q9HCX4 862 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 SHOC2Q9UQ13 582 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PCDHGC5Q9Y5F6 944 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 C2orf81A6NN90 581 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 EPHB6O15197 1021 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TIMM44O43615 452 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TSC22D2O75157 780 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TXNP10599 105 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PSMB9P28065 219 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 RPA3P35244 121 aaPredicted RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 NPTX2P47972 431 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PKNOX1P55347 436 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ALDH6A1Q02252 535 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CAMK2GQ13555 558 aaPredicted RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 RRP1BQ14684 758 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TAF2Q6P1X5 1199 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 LRRC55Q6ZSA7 311 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 C11orf74Q86VG3 221 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 TMEM139Q8IV31 216 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 OR8H2Q8N162 312 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 ATP6V0D2Q8N8Y2 350 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 CYP2W1Q8TAV3 490 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 MAGED4Q96JG8 741 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 APOL5Q9BWW9 433 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PCDH9Q9HC56 1237 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 PIH1D1Q9NWS0 290 aaKnown RBP9.08□□□□□ -0.96
PTPRM-202ENST00000400053 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
PTPRM-202ENST00000400053 WNT7AO00755 349 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms