RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 CYP1A2P05177 515 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 COPZ1P61923 177 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 MS4A2Q01362 244 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 HSPA14Q0VDF9 509 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 MTM1Q13496 603 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
RETREG1-202ENST00000399793 ABCB5Q2M3G0 1257 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 ZCCHC23Q6ZST2 131 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 PHTF2Q8N3S3 785 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 DCLK2Q8N568 766 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 TOR1AIP2Q8NFQ8 470 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 GIMAP1Q8WWP7 306 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 TRIB2Q92519 343 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 SH3YL1Q96HL8 342 aaPredicted RBP8.97□□□□□ -0.97
RETREG1-202ENST00000399793 MMP19Q99542 508 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 ANKRD60Q9BZ19 345 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 C12orf10Q9HB07 376 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
RETREG1-202ENST00000399793 PARVAQ9NVD7 372 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 THG1LQ9NWX6 298 aaKnown RBP8.97□□□□□ -0.97
RETREG1-202ENST00000399793 SIRPGQ9P1W8 387 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.97□□□□□ -0.97
RETREG1-202ENST00000399793 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 AFG3L2Q9Y4W6 797 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 IKBKGQ9Y6K9 419 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 NUP188Q5SRE5 1749 aa8.97□□□□□ -0.97
RETREG1-202ENST00000399793 DIP2BQ9P265 1576 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 MAGEB6P1A0A0J9YX57 407 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 SNAP23O00161 211 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 ZBTB7AO95365 584 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 COX4I1P13073 169 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 FGFR3P22607 806 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 ETFBP38117 255 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 NFE2Q16621 373 aaPredicted RBP8.96□□□□□ -0.97
RETREG1-202ENST00000399793 HIF1AQ16665 826 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 MSS51Q4VC12 460 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 RNASEH2BQ5TBB1 312 aaKnown RBP8.96□□□□□ -0.97
RETREG1-202ENST00000399793 C16orf46Q6P387 395 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.96□□□□□ -0.97
RETREG1-202ENST00000399793 C8orf48Q96LL4 319 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 KLHL32Q96NJ5 620 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 AS3MTQ9HBK9 375 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 NXF1Q9UBU9 619 aaKnown RBP8.96□□□□□ -0.97
RETREG1-202ENST00000399793 PTBP2Q9UKA9 531 aaKnown RBP8.96□□□□□ -0.97
RETREG1-202ENST00000399793 DSEQ9UL01 958 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 ASTN1O14525 1302 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 ADAMTS7Q9UKP4 1686 aa8.96□□□□□ -0.97
RETREG1-202ENST00000399793 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ARHGEF35A5YM69 484 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 AURKAO14965 403 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 TSPAN1O60635 241 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 KRT6AP02538 564 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 KRT6BP04259 564 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 NAGAP17050 411 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 NCF2P19878 526 aaPredicted RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 KCNQ4P56696 695 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ECT2LQ008S8 904 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 DPYSQ14117 519 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 NPTX1Q15818 432 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CCDC14Q49A88 953 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PDPK2PQ6A1A2 396 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 SYNE4Q8N205 404 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ABHD11Q8NFV4 315 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PEX13Q92968 403 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ZNF778Q96MU6 729 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 SERPINI1Q99574 410 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 STN1Q9H668 368 aaKnown RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 GREM2Q9H772 168 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 C6orf50Q9HD87 102 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 TMEM9Q9P0T7 183 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 KCNN3Q9UGI6 736 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 MAD2L2Q9UI95 211 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PCDHA12Q9UN75 941 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PLLPQ9Y342 182 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 GOLGA8IPA6NC78 632 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 USP17L12C9JPN9 530 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 USP17L21D6R901 530 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 HTRA2O43464 458 aaPredicted RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 IDH3BO43837 385 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CSPG5O95196 566 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CDH1P12830 882 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CTRB1P17538 263 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 IL4RP24394 825 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 STX1BP61266 288 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 FNBP1LQ5T0N5 605 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 SLX4IPQ5VYV7 408 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 CTRB2Q6GPI1 263 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PLEKHG7Q6ZR37 379 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ZNF598Q86UK7 904 aaKnown RBP8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PALM2Q8IXS6 379 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 RNF148Q8N7C7 305 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 DTX3Q8N9I9 347 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 PNMA1Q8ND90 353 aa8.96□□□□□ -0.98
RETREG1-202ENST00000399793 ZSWIM2Q8NEG5 633 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms