RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
CACNA1C-209ENST00000399603 DNAJC16Q9Y2G8 782 aa12.81□□□□□ -0.36
CACNA1C-209ENST00000399603 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
CACNA1C-209ENST00000399603 PTGS2P35354 604 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 MAGEA12P43365 314 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SCTRP47872 440 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 EFHC1Q5JVL4 640 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SCAIQ8N9R8 606 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 RMDN3Q96TC7 470 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 TBCDQ9BTW9 1192 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 RACGAP1Q9H0H5 632 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 DCLRE1BQ9H816 532 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 LY9Q9HBG7 655 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SEC24AO95486 1093 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 GJA8P48165 433 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 GEMIN4P57678 1058 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 CBX3Q13185 183 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SLC29A2Q14542 456 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 HLA-DQA1Q5Y7H0 255 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 PDPK2PQ6A1A2 396 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 RIOK2Q9BVS4 552 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 EXO5Q9H790 373 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 CRISPLD1Q9H336 500 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 CHRNGP07510 517 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 ZNF366Q8N895 744 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SERPINB12Q96P63 405 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 ZBTB5O15062 677 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 FCGR1AP12314 374 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 HSD17B3P37058 310 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 MGAT5BQ3V5L5 792 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 BDH2Q9BUT1 245 aa12.8□□□□□ -0.36
CACNA1C-209ENST00000399603 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 NR6A1Q15406 480 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 CINPQ9BW66 212 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 WRBO00258 174 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TIPRLO75663 272 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 NPR2P20594 1047 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 SLC1A1P43005 524 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 SPIRE1Q08AE8 756 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 RASA2Q15283 850 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 CARTPTQ16568 116 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 NRF1Q16656 503 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 DCAF6Q58WW2 860 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 FAM220AQ7Z4H9 259 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 AGO2Q9UKV8 859 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 RAD51CO43502 376 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 PRH1P02810 166 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ADRA2BP18089 450 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 KRT35Q92764 455 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TRIT1Q9H3H1 467 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 PRMT3O60678 531 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 CCNA2P20248 432 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 BPIFB6Q8NFQ5 453 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 RAD54LQ92698 747 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 NSMCE2Q96MF7 247 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ZSCAN5AQ9BUG6 496 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ERI2A8K979 691 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 KMOO15229 486 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TSPAN1O60635 241 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 WRNIP1Q96S55 665 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 PAK5Q9P286 719 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 CIDEBQ9UHD4 219 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 ITIH6Q6UXX5 1313 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 FAM172BPA6NC97 362 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 OR5F1O95221 314 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 TCF4P15884 667 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 BHLHB9Q6PI77 547 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 PROM2Q8N271 834 aa12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-209ENST00000399603 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms