RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ULBP1Q9BZM6 244 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 RUBCNLQ9H714 662 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 SMG5Q9UPR3 1016 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 GVINP1Q7Z2Y8 2422 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 PATJQ8NI35 1801 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 A0A0A0MRY4 1105 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 HOXC11O43248 304 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 GREM1O60565 184 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 KAT7O95251 611 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 KRT5P13647 590 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 GRIA2P42262 883 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 MTIF2P46199 727 aaKnown RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 PXNP49023 591 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 SEC13P55735 322 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 VAC14Q08AM6 782 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 EFEMP1Q12805 493 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 PRR23BQ6ZRT6 265 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 IRF2BP1Q8IU81 584 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 SIX6OS1Q8N1H7 587 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 DCLK2Q8N568 766 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 SLC35F5Q8WV83 523 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 FAM81BQ96LP2 452 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 GBP4Q96PP9 640 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 DCLK3Q9C098 648 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 THAP9Q9H5L6 903 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 RASAL2Q9UJF2 1139 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 ZNF510Q9Y2H8 683 aa12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 KIF26AQ9ULI4 1882 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-201ENST00000399292 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 TULP3O75386 442 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 STC2O76061 302 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 LCP1P13796 627 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 HOXC13P31276 330 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 ZNF132P52740 706 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 MFAP3P55082 362 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 DMC1Q14565 340 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 EXOC3L4Q17RC7 722 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 DPCR1Q3MIW9 517 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 PMF1Q6P1K2 205 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 GBP6Q6ZN66 633 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 CEP68Q76N32 757 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 ENOSF1Q7L5Y1 443 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 C12orf40Q86WS4 652 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 KIAA2013Q8IYS2 634 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 XPO6Q96QU8 1125 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 BBS2Q9BXC9 721 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 CNGB3Q9NQW8 809 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 MARCH2Q9P0N8 246 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
SMIM11A-201ENST00000399292 EP300Q09472 2414 aaPredicted RBP12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 SLC12A8A0AV02 714 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 NEDD8-MDP1E9PL57 170 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 M0QYV0 167 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 MED7O43513 233 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 APBB3O95704 486 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 CALCAP01258 141 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 KLKB1P03952 638 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 HMBSP08397 361 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 TYRP14679 529 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 SLC9A1P19634 815 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 CHKAP35790 457 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 RGS7P49802 495 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 KDSRQ06136 332 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 MESP2Q0VG99 397 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 LPAL2Q16609 132 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 LAIR1Q6GTX8 287 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 TRIM65Q6PJ69 517 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 TPGS1Q6ZTW0 290 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 ETFBKMTQ8IXQ9 262 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 SCML4Q8N228 414 aa12.31□□□□□ -0.44
SMIM11A-201ENST00000399292 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms