RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 KRT39Q6A163 491 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 GUF1Q8N442 669 aaKnown RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 ANKRD52Q8NB46 1076 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 UCMAQ8WVF2 138 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 FAXDC2Q96IV6 333 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 ARID3AQ99856 593 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 NUP58Q9BVL2 599 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 SLC2A11Q9BYW1 496 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 GAREM1Q9H706 876 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 TOR4AQ9NXH8 423 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 KIAA1522Q9P206 1035 aaPredicted RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 DSPP15924 2871 aaKnown RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 MEI4A8MW99 385 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 TIMM44O43615 452 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 SYNCRIPO60506 623 aaKnown RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 DKK1O94907 266 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 EPHX1P07099 455 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 KRT13P13646 458 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 HLA-EP13747 358 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 HOXD9P28356 352 aaPredicted RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 HLA-FP30511 346 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 TKTL1P51854 596 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 NDUFA8P51970 172 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 EIF4HQ15056 248 aaKnown RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 HLA-BQ31612 363 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 KIAA0907Q7Z7F0 614 aaPredicted RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 BAHD1Q8TBE0 780 aaPredicted RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 DDI1Q8WTU0 396 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 EEF2KMTQ96G04 330 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 ULBP1Q9BZM6 244 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 MIR1-1HGQ9H1L0 117 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 RAB20Q9NX57 234 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
TFF3-202ENST00000398431 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
TFF3-202ENST00000398431 A0A1B0GVT2 93 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 TSPAN3O60637 253 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 GABBR2O75899 941 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 ZBED1O96006 694 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 CYBBP04839 570 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.4
TFF3-202ENST00000398431 ACSL1P33121 698 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 SYKP43405 635 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
TFF3-202ENST00000398431 PDE4CQ08493 712 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 PTPRNQ16849 979 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 MPPE1Q53F39 396 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 ADIPOR2Q86V24 386 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 ARHGAP18Q8N392 663 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 OR2T3Q8NH03 318 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 CYB5D2Q8WUJ1 264 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 PLD4Q96BZ4 506 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 CIPCQ9C0C6 399 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 C6orf106Q9H6K1 298 aaPredicted RBP12.58□□□□□ -0.4
TFF3-202ENST00000398431 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 STOML2Q9UJZ1 356 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 STRIP2Q9ULQ0 834 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
TFF3-202ENST00000398431 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 E7ENQ6 273 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 ATXN1LP0C7T5 689 aaKnown RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 MATKP42679 507 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 SGSHP51688 502 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 KIF19Q2TAC6 998 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 FAM124AQ86V42 546 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 TTC39CQ8N584 583 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
TFF3-202ENST00000398431 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 ORAI3Q9BRQ5 295 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 PCED1AQ9H1Q7 454 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 PRSS16Q9NQE7 514 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 COQ4Q9Y3A0 265 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 HBS1LQ9Y450 684 aaKnown RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
TFF3-202ENST00000398431 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
TFF3-202ENST00000398431 FASNP49327 2511 aaKnown RBP12.56□□□□□ -0.4
TFF3-202ENST00000398431 KCNK3O14649 394 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms