RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 KIAA0754O94854 1291 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 CSH1P0DML2 217 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 CSH2P0DML3 217 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 PTGIRP43119 386 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 TWF1Q12792 350 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 MFSD7Q6UXD7 560 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 ADAT2Q7Z6V5 191 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 FAM131BQ86XD5 332 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 KCTD6Q8NC69 237 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 RNF139Q8WU17 664 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 TEKT4Q8WW24 435 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 CENPTQ96BT3 561 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 TLCD1Q96CP7 247 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 TRIM51Q9BSJ1 452 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 PBX4Q9BYU1 374 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 DPH5Q9H2P9 285 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 TLR8Q9NR97 1041 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 DDIT4Q9NX09 232 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 INSL5Q9Y5Q6 135 aa20.05■□□□□ 0.8
PDLIM2-204ENST00000397760 FSCN2O14926 492 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 RALAP11233 206 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 KDELR1P24390 212 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 FNTAP49354 379 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 COPS2P61201 443 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 CAMK1Q14012 370 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 VEPH1Q14D04 833 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 ERMARDQ5T6L9 678 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 LILRA6Q6PI73 481 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 SPOCD1Q6ZMY3 1216 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 ANKS1BQ7Z6G8 1248 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 C12orf50Q8NA57 414 aaPredicted RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 DQX1Q8TE96 717 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 PGM2Q96G03 612 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 SNRNP25Q9BV90 132 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 TMEM109Q9BVC6 243 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 PIGVQ9NUD9 493 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 GPATCH2LQ9NWQ4 482 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 MTRF1LQ9UGC7 380 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 PLXNA4Q9HCM2 1894 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 GMNCA6NCL1 334 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 C3orf70A6NLC5 250 aaPredicted RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 F9P00740 461 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 IRS1P35568 1242 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 PSEN1P49768 467 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 GPM6BQ13491 265 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 BYSLQ13895 437 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 KRT71Q3SY84 523 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 TAC4Q86UU9 113 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 CCDC185Q8N715 623 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 PRELID2Q8N945 189 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 OR2W6PQ8NHA6 318 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 HEMGNQ9BXL5 484 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 OSBPL8Q9BZF1 889 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 MSRAQ9UJ68 235 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 NUDT5Q9UKK9 219 aa20.04■□□□□ 0.8
PDLIM2-204ENST00000397760 TCRBV7S2A1N4TA0A589 114 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 MDM4O15151 490 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 HMGA1P17096 107 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 PMS2P54278 862 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 EPHB3P54753 998 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 CDH6P55285 790 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 IFFO1Q0D2I5 559 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 TAF12Q16514 161 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 ZC3H12AQ5D1E8 599 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 SLCO2A1Q92959 643 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 MAGOHBQ96A72 148 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 HERPUD2Q9BSE4 406 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 NKX2-4Q9H2Z4 354 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 CERS4Q9HA82 394 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 WDR6Q9NNW5 1121 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 CLIC5Q9NZA1 410 aa20.03■□□□□ 0.8
PDLIM2-204ENST00000397760 H3BNC9 293 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 CD48P09326 243 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 RARGP13631 454 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 KRT10P13645 584 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 HPDP32754 393 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 CDKN2BP42772 138 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 SLMAPQ14BN4 828 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 TFDP3Q5H9I0 405 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 KAZNQ674X7 775 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 ZDHHC24Q6UX98 284 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 KREMEN2Q8NCW0 462 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 CASP10Q92851 521 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 CENPHQ9H3R5 247 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 SFMBT1Q9UHJ3 866 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 FBXW11Q9UKB1 542 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 FZD10Q9ULW2 581 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 AP4E1Q9UPM8 1137 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 ATP8A1Q9Y2Q0 1164 aa20.02■□□□□ 0.8
PDLIM2-204ENST00000397760 GLUD1P00367 558 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 IGLV3-25P01717 112 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 ARSEP51690 589 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 KRT81Q14533 505 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 PDK2Q15119 407 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 RAB30Q15771 203 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 CA9Q16790 459 aa20.02■□□□□ 0.79
PDLIM2-204ENST00000397760 CCDC149Q6ZUS6 474 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms