RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 UBAP1Q9NZ09 502 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 POMPQ9Y244 141 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 ZMPSTE24O75844 475 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ERBB2P04626 1255 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 EDN1P05305 212 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 TFAP2AP05549 437 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 RBL1P28749 1068 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PMLP29590 882 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 NAMPTP43490 491 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 RXRGP48443 463 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 SLC1A6P48664 564 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 OXCT1P55809 520 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 GHRHRQ02643 423 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 TBL3Q12788 808 aaKnown RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 GRM2Q14416 872 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 CDO1Q16878 200 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 DUOXA2Q1HG44 320 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 WDR49Q8IV35 697 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 BRSK2Q8IWQ3 736 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ADGRF2Q8IZF7 708 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 GPRASP2Q96D09 838 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PRICKLE1Q96MT3 831 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PRPF18Q99633 342 aaKnown RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PCDH18Q9HCL0 1135 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ASNSD1Q9NWL6 643 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 CIDEBQ9UHD4 219 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ITGA11Q9UKX5 1188 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 DTNAQ9Y4J8 743 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 SLC15A5A6NIM6 579 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 TTLL13PA6NNM8 815 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 H3BSA7 217 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ATP9BO43861 1147 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PIGRP01833 764 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PDGFRBP09619 1106 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 KCNA2P16389 499 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 RAP1GAPP47736 663 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 SERPINB9P50453 376 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 AP3M2P53677 418 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ANKDD1AQ495B1 522 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 TEDDM1Q5T9Z0 273 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 N4BP2L1Q5TBK1 243 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PDPK2PQ6A1A2 396 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 SLC15A3Q8IY34 581 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ACTRT2Q8TDY3 377 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 CMTM5Q96DZ9 223 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF778Q96MU6 729 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PEBP4Q96S96 227 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 ADPGKQ9BRR6 497 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PLAC1Q9HBJ0 212 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 PNPOQ9NVS9 261 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 SPATA7Q9P0W8 599 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 LZTS1Q9Y250 596 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
CAPN3-206ENST00000397163 HMX2A2RU54 273 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 WDR46O15213 610 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 MED7O43513 233 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SLC5A2P31639 672 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 HOXD12P35452 270 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 MTTPP55157 894 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 TUBB3Q13509 450 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PDE1CQ14123 709 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SH3PXD2AQ5TCZ1 1133 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM53Q6P2H8 277 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SCYL2Q6P3W7 929 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PGM2L1Q6PCE3 622 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 UGT2A3Q6UWM9 527 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SLC7A3Q8WY07 619 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PORCNQ9H237 461 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PIK3R2O00459 728 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 LSM1O15116 133 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PRPSAP2O60256 369 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 KRT19P08727 400 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 CD151P48509 253 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ATXN3P54252 364 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 BCAR1P56945 870 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SULT2A1Q06520 285 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PPIDQ08752 370 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 TLR1Q15399 786 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 VWA5B1Q5TIE3 1220 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 MBLAC2Q68D91 279 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 RTKN2Q8IZC4 609 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 MPP5Q8N3R9 675 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 TTLL6Q8N841 843 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ARMC7Q9H6L4 198 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 RNF146Q9NTX7 359 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 GPATCH2LQ9NWQ4 482 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 COL2A1P02458 1487 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms