RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 BRD9Q9H8M2 597 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 CYP4F11Q9HBI6 524 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 HSFX1Q9UBD0 423 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 USP18Q9UMW8 372 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC13-209ENST00000397117 CCDC66A2RUB6 948 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 KCNK3O14649 394 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 ZNF197O14709 1029 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 TNFRSF10BO14763 440 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CAPN9O14815 690 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 SOAT2O75908 522 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 RNF8O76064 485 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 PRLRP16471 622 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 TCP1P17987 556 aaKnown RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 FLT3P36888 993 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 GPR15P49685 360 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 OGDHQ02218 1023 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 ACAP1Q15027 740 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 SDHAF4Q5VUM1 108 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 SCML4Q8N228 414 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CELF5Q8N6W0 485 aaKnown RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 SPATA17Q96L03 361 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 ASB16Q96NS5 453 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 OSBPL9Q96SU4 736 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 IER2Q9BTL4 223 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 TRIM62Q9BVG3 475 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 LMAN1LQ9HAT1 526 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 POPDC2Q9HBU9 364 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC13-209ENST00000397117 GMEB2Q9UKD1 530 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CNOT1A5YKK6 2376 aaKnown RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 E7ENQ6 273 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 PRRG1O14668 218 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 MOSPD3O75425 235 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 DAB1O75553 588 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 RTN3O95197 1032 aaPredicted RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 CXCR5P32302 372 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CTNNA1P35221 906 aaKnown RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 MATKP42679 507 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 TERF1P54274 439 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 AMPD2Q01433 879 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 PM20D1Q6GTS8 502 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
SEC13-209ENST00000397117 VITQ6UXI7 678 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 DENND5BQ6ZUT9 1274 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 RHOT1Q8IXI2 618 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 IRF7Q92985 503 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CRISPLD1Q9H336 500 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 TRPV4Q9HBA0 871 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 INSL5Q9Y5Q6 135 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
SEC13-209ENST00000397117 PTPRDP23468 1912 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 DPYSL4O14531 572 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 SRGAP2O75044 1071 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 LTFP02788 710 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 CTNNA2P26232 953 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 YWHAQP27348 245 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 ATP11AP98196 1134 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
SEC13-209ENST00000397117 CDO1Q16878 200 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 LAIR1Q6GTX8 287 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 HS6ST3Q8IZP7 471 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 DEFB106AQ8N104 65 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 FAM3CQ92520 227 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 CD101Q93033 1021 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 PBKQ96KB5 322 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 CFAP57Q96MR6 1250 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 NCAPGQ9BPX3 1015 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 COMMD8Q9NX08 183 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 EHD2Q9NZN4 543 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 STAP1Q9ULZ2 295 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 SCML2Q9UQR0 700 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 MRFAP1Q9Y605 127 aa13.78□□□□□ -0.2
SEC13-209ENST00000397117 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
SEC13-209ENST00000397117 PSTPIP1O43586 416 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 ADRB1P08588 477 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 CHRNB1P11230 501 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 NCAM1P13591 858 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 PSMC3P17980 439 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 GDI1P31150 447 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 NOS2P35228 1153 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 PTPN9P43378 593 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 EPHA5P54756 1037 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms